| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4832 |
|---|
| Symbol | |
|---|
| ID | 6119209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 5819729 |
|---|
| End bp | 5820373 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641636413 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_001763176 |
|---|
| Protein GI | 170729150 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATACTA ACCTAATTCA TGGTCTCACG CCTCGAAATT CCTGTTTTGA GGTCGATCTC
TACTTTCAAG GCTTAGAGTC TCTCTATATG TTTCAAAAGT TTTGCAAATT AGTTTTAAAA
TTAACAGGTT GGAAAATATC CGGTGCACTA CCTACCGAGC ACCAATATGT TGCGATTGTG
GGCCCACACA CTAGCAACTG GGACTTTATT ATTGGCGTAT TAGCCCGTGG AGCTTTAGGG
GCAAAAGTTA ACTTTCTCGG TAAACATCAG CTTTTTATCC CACCTTGGGG TTGGTTTTTC
AAGGCAATAG GCGGCACCCC TGTCGACAGA CGAAAGAGCA ACAACTTAGT CGATGGCGTT
GTGCACCTGT TTCAAGATAA CCCTAAGTTT TCACTCGCCT TAGCGCCAGA AGGTACTCGT
AGCCCAGTAA AACGTTGGAA AACAGGGTTT TATCATATCG CCAGCAAGGC CAATGTTCCC
ATTGTTACCG TAGGCTTAGA TTTCGGCAGC AAAACTGTAT TGATCGCCAA TGGCATAGAT
ACCACAGACA ATATGCTGCA AGATATGGAT AAGATCATCG ACTTTTACCG CTCAATAAAG
GGTTGCCATC CTAAGGTTAT CCCTGACTTT ATTCCGGGAA AATAG
|
|---|
| Protein sequence | MYTNLIHGLT PRNSCFEVDL YFQGLESLYM FQKFCKLVLK LTGWKISGAL PTEHQYVAIV
GPHTSNWDFI IGVLARGALG AKVNFLGKHQ LFIPPWGWFF KAIGGTPVDR RKSNNLVDGV
VHLFQDNPKF SLALAPEGTR SPVKRWKTGF YHIASKANVP IVTVGLDFGS KTVLIANGID
TTDNMLQDMD KIIDFYRSIK GCHPKVIPDF IPGK
|
|---|
| |