| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4804 |
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| Symbol | |
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| ID | 6119181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5788840 |
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| End bp | 5789709 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636385 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001763148 |
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| Protein GI | 170729122 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0414707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGCAT TTGAGAGAGC ACAGCTCTTT AAGTTAATCG TTGAACTGGG TTCCATGGTA
GCGACAGCTA AGGCTCTCAA CATCAGTCCA TCGGCGGTAA GTAAGCGTTT GGCTGAGTTG
GAATCTCAGC TCGGGGTACA ACTGCTAAAG CGTTCGACAC GGAGCATTGT AATCACAGAA
GCGGGTGAGC ACTTTTATCA GGAAGTGAGA GAACTTAGTG GACGTTGGCA GTCTTTGGTT
GATGAAACCG CTACATTAGG AGAGAGCCCC AGTGGTCGCT TGACTGTAGC CGCACCAGCC
CCTGTTTTAA GTCGAGTGTT AATGCCTATG TTGCCCGGTT TTAATGCTAA TTTCCCTGAG
ATTAAGTTGG AGTTATTGTC GGTTGATTAC GATGACTTAC CACTGCGCAG CGCCGATATC
TCTCTTGCAA GGCATATAGA AGCGTTCGAT TCAGGTACTT TTGTTGGTGT GCCGCTGTGT
GAATACCGTA ATGGCCTGTT TGCTTCACCT GAATATATTA ACAAGCATGG CAGCCCCCAT
AAGGTTGAGG AGCTGGTTCA ACATAGTTGC CTCTGTTATG GAAAGGAGAA TCGCTCTTAC
CTTTGGTGTT TAGGTGAGGA GAGTGTCGAA GTGAAAGGGA GGTTGGTGAG TGATAATACA
GAGGTCATCA TTCAAGCTGC GGTGCAGGGG ATGGGGATTG CCTATATCCC TAGGATGATT
ATTGAGAGGG AGCTTGCTTG TGGAGAGCTT ATGTCTGTTT TAACTTATGT AGAAAGTCAG
CGGTTTTCCA TGTGGGGTTA TTACCAGCAG TTGGCTTATC TGCCGGCGAA GACCCGTGCT
TTTATCGATT ATTTTCGTCA CTCTTGGTGA
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| Protein sequence | MGAFERAQLF KLIVELGSMV ATAKALNISP SAVSKRLAEL ESQLGVQLLK RSTRSIVITE
AGEHFYQEVR ELSGRWQSLV DETATLGESP SGRLTVAAPA PVLSRVLMPM LPGFNANFPE
IKLELLSVDY DDLPLRSADI SLARHIEAFD SGTFVGVPLC EYRNGLFASP EYINKHGSPH
KVEELVQHSC LCYGKENRSY LWCLGEESVE VKGRLVSDNT EVIIQAAVQG MGIAYIPRMI
IERELACGEL MSVLTYVESQ RFSMWGYYQQ LAYLPAKTRA FIDYFRHSW
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