| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4772 |
|---|
| Symbol | |
|---|
| ID | 6119149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5762725 |
|---|
| End bp | 5763375 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641636353 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001763116 |
|---|
| Protein GI | 170729090 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000117044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AATATGTGAC AAGAGACTCC CTATTTAAAA CCTCTGCGAA AGAGTATATC
GAACAGAAAG AGCTGGATAG TGAGCAGTTA GATAGATTCG AAAACCTGCT TGGTGGTTAT
ACCGAGGAGG CAAGGCCTAA AGAGAGTAAT ACTGCTTTAG GGGTTTCTCG TCGCACTAGT
GTTTATATGG CGATTACTGC AAGTGTGGTG ATGCTATTGA TGATGAGTTT GAATCTCTAC
CTTCAGCAGC CATCAAAGAT TGGCCTGATA GCCAATGAAG TGGCGATGAA TCATATTAAG
ATGAAGCCTT TAGAGTTAAA AACAGAGCAG CTTCCTCCGC TACGGGACTA TTTTACCCAA
CTGGATTTTT CTATTGTTAA TTCATCAATT TTTAGTCAGC AGAATAATAG CATGTTAGGT
GGGCGTTACT GTTCGATCCA AGGGGTGACG GCTGCTCAGA TCAGATATCA AACCGCTGCA
GGTAAGAAGG TTACTCTGTA TGAGGTGGGC TATGATCCCC AGATCTATGG CGTGTTACCG
GACGTGGATA AAGGGGAGAA GCCCTTGTAT ATCGAAGTTA AGGGAATAAG CGTTAACCTT
TGGGTTGAGA AAGGACTGTT GATGGCCGAA GCCAGAGATA TAGGCAGCTA G
|
|---|
| Protein sequence | MNKKYVTRDS LFKTSAKEYI EQKELDSEQL DRFENLLGGY TEEARPKESN TALGVSRRTS
VYMAITASVV MLLMMSLNLY LQQPSKIGLI ANEVAMNHIK MKPLELKTEQ LPPLRDYFTQ
LDFSIVNSSI FSQQNNSMLG GRYCSIQGVT AAQIRYQTAA GKKVTLYEVG YDPQIYGVLP
DVDKGEKPLY IEVKGISVNL WVEKGLLMAE ARDIGS
|
|---|
| |