Gene Swoo_4752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4752 
Symbol 
ID6119129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5733001 
End bp5734215 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content46% 
IMG OID641636333 
Producthypothetical protein 
Protein accessionYP_001763096 
Protein GI170729070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000184435 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000405781 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCTCA ATACCAGAAG CTTGCTTTCA CTCCTGCTAT TTGTAAGTTT AGCCATGCCG 
CTCCAAGCCG CTGTTAAGCC CTACTCTAAA GTGGGCAGCT CGCCAATCCA AGCAAGTATA
AAACCCTACA CAGCAGGGTT AATCATGCGC GGAAAATATG ATGGTACCAA GTGTGAAACG
CCTAGAGGTA ATATGGCGGC GGGTTATTGT CAGGTTTACT GGAAAGATAT AGAACCTGTA
AAGGGACAAT TTAACTGGAG CGTAATCGAT AGGGCTGTCA CCGCAGCCAA AAGTTACAAT
GCTGCACAGG GCCTCACTGA CAAAGATGGC TACAAGGTGA TGATACGTAT TCGTACTGGC
GTGTACGCCC CAGACTGGGT AAAGAGTGAT CCCAACGTAG GCAAGATCTC ATGGCAGTTC
AAGAACTCAA GCCCTAAACA GACCTTCCAA CTCCCCCTAT TTTGGAATAC ACCCTATCAA
AATCACTATG AAAACCTGAT GCAAGCAGCT GCTAACCGTT ATGACAATGA GCTAAGTATA
GGCGGAGTTG CGGCATCCAT GTGTATGACT GTTCACACTG AAATTATGTG GAACCGTACA
GGAAGAAAGG AGGTTCGGGC CGCTAATATG TCAACCATGC GCGCCCTTGG CGATAAGAGC
TATACCAATG AGAAAGACTA TGCCTGCCTG CAACGCCAAA TACAGATCCA TTCGAACACC
TGGCAAAAAA CACCAACCCT GTTTGGAAGC CACCTGTACC AAGTTTACAA CTACAGTAAC
GGTGGTAAAA GCAGCGATTA CAACAAAACT AAACAGCTTT TTAATGAGTG CCGCTCAAGT
AGTAAGTTAG GTAAACGCTG CGTATTGGGT AATAACAGCC TGCGCCACGA TGAGGTTAAC
AACGACGGCT CAGTCAATCA GCTGCTTTTT GAAATTGCTC AAGCAGGCGA TCCTGTCTAT
TTCCAAACCA ATGTATTTAA GAGTGATCGT AAAAAGCGCT TTGGTGTCGA TGAGCTAAAA
GGTGCCATGG ATAATGCCGC TAACTGGGGA GCGGTTGCAG TAGAGATACC TATGGCTTGG
GATTGCAGTG ATTACTTCAA TAAAAGTGGT TGTAGCTCAG CCACGGTTAA GCAACGTCAG
GGTGAGTTCC ACAGCTATCA AAACAGATTG AAAGACAATG TTGTCAGAAT AAGCCCCGTA
AAAGAAACCA AGTAA
 
Protein sequence
MNLNTRSLLS LLLFVSLAMP LQAAVKPYSK VGSSPIQASI KPYTAGLIMR GKYDGTKCET 
PRGNMAAGYC QVYWKDIEPV KGQFNWSVID RAVTAAKSYN AAQGLTDKDG YKVMIRIRTG
VYAPDWVKSD PNVGKISWQF KNSSPKQTFQ LPLFWNTPYQ NHYENLMQAA ANRYDNELSI
GGVAASMCMT VHTEIMWNRT GRKEVRAANM STMRALGDKS YTNEKDYACL QRQIQIHSNT
WQKTPTLFGS HLYQVYNYSN GGKSSDYNKT KQLFNECRSS SKLGKRCVLG NNSLRHDEVN
NDGSVNQLLF EIAQAGDPVY FQTNVFKSDR KKRFGVDELK GAMDNAANWG AVAVEIPMAW
DCSDYFNKSG CSSATVKQRQ GEFHSYQNRL KDNVVRISPV KETK