| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4729 |
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| Symbol | |
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| ID | 6119106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5707552 |
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| End bp | 5707971 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636311 |
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| Product | general secretion pathway protein I |
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| Protein accession | YP_001763074 |
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| Protein GI | 170729048 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.768046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTTCGA TGAGCACTAA TATTCGTTCC TCTATTGGTT CTTCTCGCTC CCGCAAAGCG
AAAGGGATGA CACTGCTTGA GGTGATTGTG GCGCTTGCCG TGTTTTCAAT CGCTGCCGTC
TCTATCACTA AAAGCTTAGG TGAGCAGATG GCGAATATGC CCATTTTAGA GCAGCGTACT
TACGCTCAAT GGGTTGCCGA CAATGTGATG GTTGATGCCA GATTGGAGGC CAAATTTCCC
GATCTTGGTA AGAAAGATGG GCAAGCAGAG TTAGCCGGTA AAGAGTGGTA CTGGCGCAAA
GAGGTGGTGA AGACCACAGA CGATAAGTTT CGCATGATCC GAGTCAGTGT CAGTGACGAT
GAACGTTATG AACGTATTGT CGCTCAGGTA AGTAGTTATG TGCTCAACCA AGATAAATAA
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| Protein sequence | MVSMSTNIRS SIGSSRSRKA KGMTLLEVIV ALAVFSIAAV SITKSLGEQM ANMPILEQRT
YAQWVADNVM VDARLEAKFP DLGKKDGQAE LAGKEWYWRK EVVKTTDDKF RMIRVSVSDD
ERYERIVAQV SSYVLNQDK
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