| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4701 |
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| Symbol | rplK |
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| ID | 6119070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5671907 |
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| End bp | 5672335 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636275 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001763046 |
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| Protein GI | 170729020 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000419074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000427936 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA AAGTTGATGG TTACATCAAG CTACAAGTAG CAGCCGGTGC TGCAAACCCG
TCGCCACCAG TCGGCCCTGC ATTGGGTCAG AAGGGTGTTA ACATCATGGA ATTCTGTAAA
GCATTCAACG CTCGTACTGA AAAGTTCGAG AAAGGTATGC CAATTCCAGT AGTTATCACT
GTATATAGTG ATCGCTCTTT CACTTTCGAA ACTAAGACGC CACCTGCATC TTTCCTACTG
CTTAAAGCAG CTGGTCTGAA GTCTGGTTCT GGCCGTCCTA ACACTGAGAA AGTGGGAACT
ATCAAGCGTA GCGCTGTTCA GGAAATTGCT GAAACTAAAG CGGCTGATAT GACTGGTGCT
GATATTGAAG CGATGACTCG CTCAATTGAA GGTACTGCGC GCTCAATGGG TTTGGTAGTA
GAGGACTAA
|
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| Protein sequence | MAKKVDGYIK LQVAAGAANP SPPVGPALGQ KGVNIMEFCK AFNARTEKFE KGMPIPVVIT
VYSDRSFTFE TKTPPASFLL LKAAGLKSGS GRPNTEKVGT IKRSAVQEIA ETKAADMTGA
DIEAMTRSIE GTARSMGLVV ED
|
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