| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4653 |
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| Symbol | |
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| ID | 6119022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5633061 |
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| End bp | 5633636 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641636227 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_001762998 |
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| Protein GI | 170728972 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000929627 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.021972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTAA TCGCTGATTT GCTTAAGGTA TCTTTATTAG TTGCTAGTTG TTTTTCTATT
AGTACCGTTT CTGCATATCC AGGTATGCAG AAACAGGCAG AAGGTGAAAG TCAGACTAAT
GTCGGGCTTA TTAGCATCTT GCCTCAGCCT TTTCCTATTA CTGCAGTCCC ATTTAAAGAT
GAACAGGGTA AAGCTGTAGA TTTTAGTCAG TATAAAGGGA AAGTCCTGAT GGTAAACATG
TGGGCAACTT GGTGCCCTCC ATGTGTACGT GAGCTTCCAG CTATTTCACG CTTGTCTGAA
AAGTTCGATA AACAGGACTT TGAAATTTTA CCTATCTCGA TAGATCTCGA AGGAAAGGGT
AAGGTTGAGC CTTTTCTTAA AGAGTTAGGA ATGGAGTCTT TTAACTCGTT TTATGATGAG
ACGCAAAACC TGAGAGAGGT ATTTCCACTT GATACAATTC CAGCGACGTT TATCTTAAAC
AGTAAAGGCG AGCTCATCGC ATTTGTTCGT ACCTTTGTTG ATTGGGACGA CAAACAAGCG
GCAGACCTAA TACAGGGCTT TATTGATAAA CAGTAA
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| Protein sequence | MKLIADLLKV SLLVASCFSI STVSAYPGMQ KQAEGESQTN VGLISILPQP FPITAVPFKD
EQGKAVDFSQ YKGKVLMVNM WATWCPPCVR ELPAISRLSE KFDKQDFEIL PISIDLEGKG
KVEPFLKELG MESFNSFYDE TQNLREVFPL DTIPATFILN SKGELIAFVR TFVDWDDKQA
ADLIQGFIDK Q
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