Gene Swoo_4578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4578 
Symbol 
ID6118944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5549046 
End bp5550113 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content43% 
IMG OID641636149 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001762923 
Protein GI170728897 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000313167 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGATTGATT TTGTTAGGCA GTTAGTACTG CCGCATTTTG GCGTCCCAGC GTTGGACGCA 
AGTGTGTCTC CGTTAGGTAA TGGGCACATT AATGAGACTT TTTTGGTTCG TTGGAGTTCA
GGCGAACTGG TTCTGCAGAA GATCAACACT GATGTTTTCA AGACTCCTAA TGCTTTAGTA
GAGAACGCAC ATAAGATTGC AGCTCATCTT ACGCAAAAAT GTGAGAGTAA TGAGTACCAA
CTAAAAGTCG TTGGGCCACT GCGGACTCAA GATGAAGCGT TAGCTGTCGA TCTTAAAGAG
CATGGTTTTT GGCGCGCAAT TAACTACCTG CCTTATAGTC ATAGTATTGA AGTGGTAACC
AATGAGGAGG AGGCGTTTGC TGCAGCTAAG GCTTTTGGTC ATTTCTCCTC AGCCTTGAGC
GATCTTGATG CTACTGTACT TGAAGATGTG ATTCCTCAAT TTCATCACCT GCCAGGACGT
ATCGCTCAAT TAGAGTTAGC GGTTAGCAAA GATACACATA AACGATTAGA TACCTGTAGT
GATTGGGTTG ATATGGTGTT TGCTCAGCAA TCGCTTTTGC AAGAATTAGC CGAGATCTCA
CCGAGTTTGC CACTAAGAAC CTGTCACAAC GACACTAAGA TTAACAATAT GCTGTATGAC
AAGCGAGATA TGAGTAGCTT GGCGATTATT GATCTCGATA CCTGCATGAA GGGTCACTTG
ATGTATGATT TCGGTGATAT GGTGCGAACC TTTACCTCAC CGGAAGAGGA GGACTCTAAG
GCGCTGGATA AGGTACATGT GCGAGAATCT ATCTTCGCTG CTATCTGTCG AGGATATTTG
AGTGAGTTGG GCTCTGTGCT CAGTGAAGAT GAGAAGAGAA GCCTTTGGTT AGGCGCTCGG
GTTATCTGTT TAATGATTGG GATTCGTTTC TTAACCGATC ATCTTAATGG CGACGTATAT
TTTCATATTC ATCATGAAAA TCATAATCTT GAACGTGCGG CCAATCAGTT TACCTTGTAT
CAAAGTTTAT TAGCCCAAGA GCAGGCATTA ACACAGTATT TTAATTAG
 
Protein sequence
MIDFVRQLVL PHFGVPALDA SVSPLGNGHI NETFLVRWSS GELVLQKINT DVFKTPNALV 
ENAHKIAAHL TQKCESNEYQ LKVVGPLRTQ DEALAVDLKE HGFWRAINYL PYSHSIEVVT
NEEEAFAAAK AFGHFSSALS DLDATVLEDV IPQFHHLPGR IAQLELAVSK DTHKRLDTCS
DWVDMVFAQQ SLLQELAEIS PSLPLRTCHN DTKINNMLYD KRDMSSLAII DLDTCMKGHL
MYDFGDMVRT FTSPEEEDSK ALDKVHVRES IFAAICRGYL SELGSVLSED EKRSLWLGAR
VICLMIGIRF LTDHLNGDVY FHIHHENHNL ERAANQFTLY QSLLAQEQAL TQYFN