Gene Swoo_4566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4566 
SymbolfolE 
ID6118932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5536447 
End bp5537106 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID641636137 
ProductGTP cyclohydrolase I 
Protein accessionYP_001762911 
Protein GI170728885 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000235543 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACATCAA AAGAAGCAAT CCTAAGTGAG TCTGCACAGC TTGTTCAGGC TGCGCTATTG 
GAGCGTGGTT TAGAAACACC GATGCTACCG AGCGAGTTCA GCGCCGAAGA TCGCAAAGTT
AAGATTGAGC AACATATGCG TGAGATCTTA ACTTTGATGT CTCTTGATCT CACTGATGAT
AGCTTGGCAG ATACCCCAAA GCGTATCGCT AAAATGTATG TGGATGAGAT CTTCTCTGGC
CTAGATTATG CCAACTTTCC AAAGATCACT GTCATTGAAA ATAAGATGGG ATTCGATGAG
ATGGTTAAGG TCAATGACAT CAGTCTAACC AGTACTTGTG AACATCATTT AGTGACCATA
GATGGACTCG CCAGAGTGGC TTACTTGCCA CGGAAAAACA TCATAGGTCT ATCGAAGATT
AACCGTATTG TGCGATTTTT TGCCCAGCGT CCTCAAGTTC AGGAGCGGCT AACACAACAA
GTTTTAGTCG CCCTACAGAC ACTGCTCGAA ACTAAAGATG TCGCCGTTAA GATGGACGCG
GTTCACTACT GCGTGAAATC CCGCGGCGTG ATGGACTCAA CCAGCTCAAC CACAACCACA
GCATTGGGTG GCATTTTTAA ATCCAATCCA GCGACAAGAG CAGAATTTCT TAGTAACTAA
 
Protein sequence
MTSKEAILSE SAQLVQAALL ERGLETPMLP SEFSAEDRKV KIEQHMREIL TLMSLDLTDD 
SLADTPKRIA KMYVDEIFSG LDYANFPKIT VIENKMGFDE MVKVNDISLT STCEHHLVTI
DGLARVAYLP RKNIIGLSKI NRIVRFFAQR PQVQERLTQQ VLVALQTLLE TKDVAVKMDA
VHYCVKSRGV MDSTSSTTTT ALGGIFKSNP ATRAEFLSN