Gene Swoo_4545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4545 
Symbol 
ID6118911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5510448 
End bp5510936 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content45% 
IMG OID641636116 
Producthypothetical protein 
Protein accessionYP_001762890 
Protein GI170728864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.346797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0101893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCT TCCTATTGGT GGCCACATTA TCCGTTTTAC CATTCACCTT AAGTGCTGCA 
ACGACTCCAA CATCCAGTGA AGTCGTTCAG AGCTTTATAC AGGCTTATAA CCAGCATGAT
GTAGGTTTGA TGGTCTCCCA CACCACTGAC GATGTAACTT GGATGCATAT CACAGGTAAA
AAGGTTGAAG TTGAAACATC CAGTAAAGCC GAGTTTGGCG CTGCAATGAC AGATTATTTT
GAAAGCCTTA AAGGTGCCAA TGCGACGATT CTCGATATGA TGGAATCTGG CAACTATGTC
AGTACCGTAG AGAGAGTCAC GTGGGATAAT GATGGTGAAA AGCTGTCTCA GTGTAGTATC
GGAACCTTCA GAGTGGTTGA TGGTAAGCTT GCTGAGTTTT GGTACTTTCC AGCCCATTCA
TGTGATGAGC TGAGCACAAA GCCAGAGGTG GGGCCTGAAG TGGGCGTTTT GCAACAAACT
CAATATTAA
 
Protein sequence
MKPFLLVATL SVLPFTLSAA TTPTSSEVVQ SFIQAYNQHD VGLMVSHTTD DVTWMHITGK 
KVEVETSSKA EFGAAMTDYF ESLKGANATI LDMMESGNYV STVERVTWDN DGEKLSQCSI
GTFRVVDGKL AEFWYFPAHS CDELSTKPEV GPEVGVLQQT QY