| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4515 |
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| Symbol | |
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| ID | 6118871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5460358 |
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| End bp | 5461302 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641636077 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762861 |
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| Protein GI | 170728835 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.304584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACT CAGATCTAAA AATAATCCAA GGATGCGATC TCAACTTACT GCTGAGTTTA
ACAGTGCTGA TTGAGGAGGG AAGTGTTTCT AAAAGTGCCG AACGACTCGA TATCTCTCAG
CCAGCCATGA GCCAAAACCT GAAAAAGATC CGTAATCTGT TTGATGAGCC ACTTTTTGTA
AAACATGGCC AAGGGATCAA GGCAACCGAA AAGGCCCGCT CTTTATTACC AGGCTTACAT
GAGTGGCTGG AGATGAGTAG CCGGCTCATT TTACAAAAAG CCTTCGATCC TAAAGAGGTT
TATGGCGTTG TTCGCATCGC GTTTATCGAT ACCATGACCT CTGAAATTGT TCCTCAACTC
CTAGAGATGG TGATGCAAGC CGCCCCCAAT GTTGAACTGG AGTTTATCCA TAAACCTAAA
CATATGTTTT CTATGCTCGA ATCCGGCGAG TTAGATCTCT GTATTGGTGG CACTGAAACG
CCACCAGCCA ATATTTATGG CCGTAAGATA GGCTTGGAAA GGTTCTGTAT CGCCTCTAGC
CCTACACATC CCATCAACCA GTTAAGTAAC CCAAGTTTGG CAGATATATT CAGTTTCGAA
ACCGCCGAAT ATTCGGCTTC AAATGCAGCA GAACCACAGA TAACTCAGTT AGCACAAGCA
AACAACTTAA ACCGCAAAGT GAGTTTTTCA ACCAGCTCAA TGTTAGTGCT CAGAAACGGG
TTATTAGCGG GGAAGCATAT CGCATTTATC TCCGATATCG TTACTCAAAA TCCCTACTGG
AAGGATAAGC TCTCCATCTT AAAACATGAG GCACTTCCCG AGGTTGAAAG TACCCTATAT
TGGCATGCAA GAGTACATCA AGATCCGTTA GTTCAATGGT TTAAAAATAG ATGTCTGGAG
CTAGCTTCCG GTTTCAGAGA ACAGGGACTA TACCAACCAG CATAA
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| Protein sequence | MNHSDLKIIQ GCDLNLLLSL TVLIEEGSVS KSAERLDISQ PAMSQNLKKI RNLFDEPLFV
KHGQGIKATE KARSLLPGLH EWLEMSSRLI LQKAFDPKEV YGVVRIAFID TMTSEIVPQL
LEMVMQAAPN VELEFIHKPK HMFSMLESGE LDLCIGGTET PPANIYGRKI GLERFCIASS
PTHPINQLSN PSLADIFSFE TAEYSASNAA EPQITQLAQA NNLNRKVSFS TSSMLVLRNG
LLAGKHIAFI SDIVTQNPYW KDKLSILKHE ALPEVESTLY WHARVHQDPL VQWFKNRCLE
LASGFREQGL YQPA
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