| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4514 |
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| Symbol | |
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| ID | 6118870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5459373 |
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| End bp | 5460326 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641636076 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762860 |
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| Protein GI | 170728834 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.17802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.303471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTAG AGAAAAAAAT CGATCAACTT AAAGATTGCG ATCTTAACCT ATTAATTGCT
CTCTCTGTTT TACTGAAAGA GGCTCATGTC ACTAAGGCAG CAAAAGAGCT AGGGCTTTCA
CAATCGGCCA TGAGTCAAGT ACTTAAACGT CTCCGGTTGA TGTTTGAAGA CCCTCTACTG
GTTAAAAGCC ATAACGGAAT GACTCTCACC AGTAAGGCTA CCGCTATTGA AAGCGAGCTC
AAGCCTCTTC TCAACCGCGT TATCAGTATT CTTGAGGGAG ATAGATTTAA CCCGGCAACG
GCTCAAGGCC GTATCCGGGT CATGATGAAT GACGTTCTAG CTCAATTATG TATTACTCAA
CTGATATCCG AATTAGATAA ACACGCTCCA GGAATTGAGC TCGAATATGT CACCCAAAAA
ACCGATGGGT TTAAGATGCT AAGGCGTGGT CATCTCGATC TTATTGTGGG CTTTTACGAC
TCTGTACCTA AACCCATTCG CAGCCAAGCG ATATCAAGGT ACCCCTGGCA GTTGGTAACG
TTAGATCCCC AAGCTAATGA CTATATCGAT AAGATACATA ATGGTCAGAG CATCATAGAA
GAGAGTCCCT TTAAACTCTT AAGGTACCAA TATCAAGAGC ATAATCAGGC TCATATGATC
AATGCCCTCA AGGCAATCAA TGCTGAGGAA GCTTCCTATG CATTGACCTC AGGCTCTTTA
AGTACCATGA CTCAGGCGCT AACAGCCCCC TATACCGTCA CACTACTGCC ACACTACTCG
GTAAAGATTT TTGAGAAGCA TAAGGCTGAG GACTTTATCT GGCTTGGGGA TACCATAGAG
TTAGATCTCA AGGTGTGCTG GAACGAGCAT AATCGTAATC TAAAACTACA GAAATGGTTC
AGACAACTGA TCTCCTCTAT CTTAATAAAA CAGTTAAGTA ACACTGAAAT ATGA
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| Protein sequence | MPLEKKIDQL KDCDLNLLIA LSVLLKEAHV TKAAKELGLS QSAMSQVLKR LRLMFEDPLL
VKSHNGMTLT SKATAIESEL KPLLNRVISI LEGDRFNPAT AQGRIRVMMN DVLAQLCITQ
LISELDKHAP GIELEYVTQK TDGFKMLRRG HLDLIVGFYD SVPKPIRSQA ISRYPWQLVT
LDPQANDYID KIHNGQSIIE ESPFKLLRYQ YQEHNQAHMI NALKAINAEE ASYALTSGSL
STMTQALTAP YTVTLLPHYS VKIFEKHKAE DFIWLGDTIE LDLKVCWNEH NRNLKLQKWF
RQLISSILIK QLSNTEI
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