| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4502 |
|---|
| Symbol | |
|---|
| ID | 6118858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5448485 |
|---|
| End bp | 5448895 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641636064 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762848 |
|---|
| Protein GI | 170728822 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00664491 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACAA TTTTCTGGCG TGTTGCTTAC GAAGATGAGC AGTTAGGCGA GATACTCAAA
TCCAAAGCCT TGGTGTTGCC AGACCTGTCG AGATGGCCAA TCGCGAAGAA CAAGAATGAA
GAAAAAATTG TGTCCGAATT GAAGGTGGGC CATTTCGTAC TAATGGCTAA TTTCAATCCC
AACAACGAAA TTGGAACAGT GAAAGGCGTC GGGAAAATCA CGAAAAACGA CGTAGGGAGT
GTCGAAGTTG AATGGAAACG TCCAATTCCA AGTTGGAGTC TTACGCCCAA TGCACAGGGT
GGTGTTCAGG AATGGAGAAA TGAAGGTGTC TTCTGCTTCG ATGCAGAGCC AGCGAAAAGG
TACAAGCTCC AGGCGCTCAC ATCAAAACTG TTCACAGCGC ATAACAAGTA G
|
|---|
| Protein sequence | MRTIFWRVAY EDEQLGEILK SKALVLPDLS RWPIAKNKNE EKIVSELKVG HFVLMANFNP
NNEIGTVKGV GKITKNDVGS VEVEWKRPIP SWSLTPNAQG GVQEWRNEGV FCFDAEPAKR
YKLQALTSKL FTAHNK
|
|---|
| |