| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4494 |
|---|
| Symbol | |
|---|
| ID | 6118850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5436975 |
|---|
| End bp | 5437673 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641636056 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762840 |
|---|
| Protein GI | 170728814 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTAG TGCAGCTAGG TGAAAATATA TGGGCACATG AAGATAGTAT GCCATTAGGT
GGGATCCAGC TTAGGTTACG TATGACCATT GTAAAGCTGA GTTGTGGAGG TCTTTGGATA
CATTCGCCAA CAAAACCTAA TCCTGAGTTA CAAGCTGAGA TAGATGAGCT GGGCAAGGTG
ACGTTTATCG TCGGAGCCGC TAATGGGCAT AATACCTGGT TGTCTGCTTG GCAAACCGCT
TATCCTGAGG CTGAGCTATA TGTCAGTGGA GGGATCCCTA ACAAAGTGAA GCTGGATAAT
TATATGGTGC TTGAAAAGCA CTTTGAAAAT ATCTGGTGTG ATGATTTTGA ACGTGAATTT
ATGCCCAATG TTGAGCTGTT CAATGAATCG GTCTTTTTTC ATAAACCTAG CCGATCCTTA
ATCGTGACCG ATCTCATTCA AAACCACAGT GATGAGATAC CCTCAGGCTT TGCTGGAGTG
ATGACCCGCT GCGTATTTAG GCCTTTAGGC TTTAAGGGAG CCTGTGTTGC GCCACCACTT
AAGTTAGGTT TCACCATTAA AGATAAGTCA GCTTTCTCAG TCTTTATCAA GAATATTCAG
CGGTGGGATT TCGATAAAAT TATTGTGACC CATGGAGATG TAATAGCGGA TGATGCTAAA
GGCGTGTTTG CGGGTTTAGT CGAACGTTTT ATTCGCTGA
|
|---|
| Protein sequence | MSLVQLGENI WAHEDSMPLG GIQLRLRMTI VKLSCGGLWI HSPTKPNPEL QAEIDELGKV
TFIVGAANGH NTWLSAWQTA YPEAELYVSG GIPNKVKLDN YMVLEKHFEN IWCDDFEREF
MPNVELFNES VFFHKPSRSL IVTDLIQNHS DEIPSGFAGV MTRCVFRPLG FKGACVAPPL
KLGFTIKDKS AFSVFIKNIQ RWDFDKIIVT HGDVIADDAK GVFAGLVERF IR
|
|---|
| |