| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4486 |
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| Symbol | |
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| ID | 6118842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5425095 |
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| End bp | 5426639 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636048 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001762832 |
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| Protein GI | 170728806 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAA AAACTGCTCC CCAGCAATCA GCATCCCATT CGCAACCAGG CTCAAATTCG
TCTGAACCTA AGGGCCCAGA GGATAAACAT AAGCAACCTA GCTTATTTGA TGCACTTATT
CCTATCTTTG CTCTAGTGGT GATGTTAACC GCTGCGGTTT ATCTCTTCTC CTCTGACAGT
TCATCGGGCG CAAACCAGAT AGCCCTGATT ATGGCTGCGT GTGTTGCCTT GATTATTGGC
GTGAAGAACG GTTATAGCTG GAAGGAGATG GAGAAGGGGA TTGTGAGTAG TGTCTCCATG
GCAACAGGAG CCCTGCTTAT CCTCTTCACT GTGGGCTCAC TTATCGGTAC CTGGATCCTC
TCCGGTACTG TGCCTACCAT GATCTACTAC GGGATGAAGA TCTTAAACCC TGAGTATTTC
TATGCCGCAT CTTGTCTGCT CTGTGCCATT GTAGCCATCA GTATCGGTAG CTCATGGACG
GTCGCTGGCA CCTTAGGTAT CGCGCTGATT GGCGTAGCGG GCGCCATGGG GTTAAACATT
GAGATCACTG CTGGTGCGAT TATCAGTGGC GCTTACTTTG GCGATAAGAT GTCGCCAATG
TCTGATACAA CTAATCTGGC ACCAGCCGTT GCTGGTACTG ATCTTTTTAG CCATATACGG
CATATGGCGT GGACGACAGT GCCTAGCATT ATTATTGCGC TGATTGGTTT TCTCTTTTTA
GGTTTTAATA CCGAGATCCC TGCAACGGGT GCGGAGTTGG CTAGAACCAT GGCCGTGCTG
CAAACCCAGT TCTCACCCGG CCTTCATCTG CTTATTCCGC TGCTTGTAGT TCTGGCTTTA
GCCTATAAAA AGATGCCAGC TTTTCCCACT GTGATTGTTG GTACCATGGC GGGAGCAGTT
TGTGCTGCAC TATTCCAGTT CGATAATGTG CTTAAGTTTG TCAACGATCC TGAGCTGCTT
CCCGCCATTG CGCTTATTAA GGGGATCTGG ATCGCCATGT TTAATGGTTA TACAGCCAAT
ACTGGTAACT CAATGATAGA TAGCCTATTA AGCCGTGGTG GTATGGGCAG CATGATCAAT
ACGGTATGGT TGATCCTGTG TGCAATGGCG TTTGGTGGCG TGATGGAGCG AACTGGTCTG
CTTAAACGAA TTTTGCAGAG TATGCTGGTG TTTGTTAAGT CCAGTGGTAG CTTGATATTG
ACGACACTTG TCAGCTGTAT CGGAGCTAAC CTTATCACTG CGGATCAATT TATCGCCATC
ATACTGCCAG GCAGAATGCT CAAAGTTGAG TATACCAAAC ATGGTTTAGC ACCAGTAAAC
CTGAGTCGTG CCCTTGAAGA CTCGGCAACC ATCACTAGTC CTCTTGTGCC TTGGAATACT
TGCGGTGCTT ATATGGCTAG CACCTTAGGG GTGGCGACCA TTGCCTACCT TCCATTTGCC
TTCTTTAATC TTGTTTGTCC ATTAATCAGT GCAAGCTATG CCTATTTTGA CTTCAAAATT
CTAAGGCTTG AAGATATGGA AGAGGCAGAA GCGATAACTG CTTAA
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| Protein sequence | MTSKTAPQQS ASHSQPGSNS SEPKGPEDKH KQPSLFDALI PIFALVVMLT AAVYLFSSDS
SSGANQIALI MAACVALIIG VKNGYSWKEM EKGIVSSVSM ATGALLILFT VGSLIGTWIL
SGTVPTMIYY GMKILNPEYF YAASCLLCAI VAISIGSSWT VAGTLGIALI GVAGAMGLNI
EITAGAIISG AYFGDKMSPM SDTTNLAPAV AGTDLFSHIR HMAWTTVPSI IIALIGFLFL
GFNTEIPATG AELARTMAVL QTQFSPGLHL LIPLLVVLAL AYKKMPAFPT VIVGTMAGAV
CAALFQFDNV LKFVNDPELL PAIALIKGIW IAMFNGYTAN TGNSMIDSLL SRGGMGSMIN
TVWLILCAMA FGGVMERTGL LKRILQSMLV FVKSSGSLIL TTLVSCIGAN LITADQFIAI
ILPGRMLKVE YTKHGLAPVN LSRALEDSAT ITSPLVPWNT CGAYMASTLG VATIAYLPFA
FFNLVCPLIS ASYAYFDFKI LRLEDMEEAE AITA
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