| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4421 |
|---|
| Symbol | |
|---|
| ID | 6118776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5354468 |
|---|
| End bp | 5355373 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641635983 |
|---|
| Product | biogenesis protein MshI |
|---|
| Protein accession | YP_001762768 |
|---|
| Protein GI | 170728742 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGTC GATTGGCCTT TTGGCGAAAG TCTAGCGTTA AGCGTAGGCT TGGTGTCTAT
GTTTGCCCTG AAAAAGTGGT CGTATACCAT CTAAATGATG AGAACCAACA AAGTGATGTT
GCCTCAAATA ACTCAAAAGA ATTTGCATTT GATGGTGTAA ATTGGAACCG TTTGTTCGCT
GAACTGGGGA AAGAGTTTGG CCCTGCTCAA CTACAAATCA CATTAAGCTC ACCTTATTAT
CAGCTGCTAT TAGTGGATAA ACCTAATGTG GATTCAGAGG AGATGACTCA AGCACTGCTA
TGGTCGGTGA AAGATATGAT CAGTCAGCCC GTGACCGATA TACATTTAGA TTATTTCGAA
TCTCCCCAAC AAAACAGTGC CAAGTTGAGT GTTGTGATTG TAGATAGGCA GAAGCTCACT
GCTTTGATCC TTGCGGCAAA AGAGCAAGAG ATGCAACTTG CTGGTATCAC TATCGAAGAG
ATGGCCATTA GCAATCTTTT TTGGCAGGAA CCACAGGCAA AATTAGTGAT TAGTCATCAG
CCGGGGCAGG AGATATTGCT GACTGTTATC AGGCAAGGCG ATCTCTATAT GCAGAGACGA
GTCAGGGGGT TTAATCAGAT AGATACAGCG AGTGCTGAGG AGTTGGGTTT TGGCATGGCT
GATAATCTGA GCTTAGAGTT ACAAAGATCG ATGGATTATT TTGAAAGTCA ATTGCGTCAA
GCCCCTGTCT CCTCCATCGA ACTGCTTATT AATGGTCAGA CAGAGAGGTT AGCGGAATTG
GTGAGTGTTA ACTTTAACCA AGAGGTTAAC GCGATTGCCG CAGAAGGTGT TGAGAGTATC
ATGGCAAAGC TAGCTTTGAC TGAGATAGAG CGAGATGAAG TGGAGTTAGT GGAGGCGCAA
ACATGA
|
|---|
| Protein sequence | MFSRLAFWRK SSVKRRLGVY VCPEKVVVYH LNDENQQSDV ASNNSKEFAF DGVNWNRLFA
ELGKEFGPAQ LQITLSSPYY QLLLVDKPNV DSEEMTQALL WSVKDMISQP VTDIHLDYFE
SPQQNSAKLS VVIVDRQKLT ALILAAKEQE MQLAGITIEE MAISNLFWQE PQAKLVISHQ
PGQEILLTVI RQGDLYMQRR VRGFNQIDTA SAEELGFGMA DNLSLELQRS MDYFESQLRQ
APVSSIELLI NGQTERLAEL VSVNFNQEVN AIAAEGVESI MAKLALTEIE RDEVELVEAQ
T
|
|---|
| |