Gene Swoo_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4421 
Symbol 
ID6118776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5354468 
End bp5355373 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content44% 
IMG OID641635983 
Productbiogenesis protein MshI 
Protein accessionYP_001762768 
Protein GI170728742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGTC GATTGGCCTT TTGGCGAAAG TCTAGCGTTA AGCGTAGGCT TGGTGTCTAT 
GTTTGCCCTG AAAAAGTGGT CGTATACCAT CTAAATGATG AGAACCAACA AAGTGATGTT
GCCTCAAATA ACTCAAAAGA ATTTGCATTT GATGGTGTAA ATTGGAACCG TTTGTTCGCT
GAACTGGGGA AAGAGTTTGG CCCTGCTCAA CTACAAATCA CATTAAGCTC ACCTTATTAT
CAGCTGCTAT TAGTGGATAA ACCTAATGTG GATTCAGAGG AGATGACTCA AGCACTGCTA
TGGTCGGTGA AAGATATGAT CAGTCAGCCC GTGACCGATA TACATTTAGA TTATTTCGAA
TCTCCCCAAC AAAACAGTGC CAAGTTGAGT GTTGTGATTG TAGATAGGCA GAAGCTCACT
GCTTTGATCC TTGCGGCAAA AGAGCAAGAG ATGCAACTTG CTGGTATCAC TATCGAAGAG
ATGGCCATTA GCAATCTTTT TTGGCAGGAA CCACAGGCAA AATTAGTGAT TAGTCATCAG
CCGGGGCAGG AGATATTGCT GACTGTTATC AGGCAAGGCG ATCTCTATAT GCAGAGACGA
GTCAGGGGGT TTAATCAGAT AGATACAGCG AGTGCTGAGG AGTTGGGTTT TGGCATGGCT
GATAATCTGA GCTTAGAGTT ACAAAGATCG ATGGATTATT TTGAAAGTCA ATTGCGTCAA
GCCCCTGTCT CCTCCATCGA ACTGCTTATT AATGGTCAGA CAGAGAGGTT AGCGGAATTG
GTGAGTGTTA ACTTTAACCA AGAGGTTAAC GCGATTGCCG CAGAAGGTGT TGAGAGTATC
ATGGCAAAGC TAGCTTTGAC TGAGATAGAG CGAGATGAAG TGGAGTTAGT GGAGGCGCAA
ACATGA
 
Protein sequence
MFSRLAFWRK SSVKRRLGVY VCPEKVVVYH LNDENQQSDV ASNNSKEFAF DGVNWNRLFA 
ELGKEFGPAQ LQITLSSPYY QLLLVDKPNV DSEEMTQALL WSVKDMISQP VTDIHLDYFE
SPQQNSAKLS VVIVDRQKLT ALILAAKEQE MQLAGITIEE MAISNLFWQE PQAKLVISHQ
PGQEILLTVI RQGDLYMQRR VRGFNQIDTA SAEELGFGMA DNLSLELQRS MDYFESQLRQ
APVSSIELLI NGQTERLAEL VSVNFNQEVN AIAAEGVESI MAKLALTEIE RDEVELVEAQ
T