| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4405 |
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| Symbol | |
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| ID | 6118760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5340721 |
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| End bp | 5341554 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635967 |
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| Product | methylation site containing protein |
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| Protein accession | YP_001762752 |
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| Protein GI | 170728726 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGCC ACAAGAATAA TAAGAGTTAT AAGCATCATA AAAGCGCGCA AGGATTCACC
TTGGTCGAGA TGGTCACAGT GATCATTGTG CTCGGTGTTT TAGTGCTAGG TGTCAGTAGT
TTTGTTGTAT TAGGAACAAG GATTTTTGTT GAGTCAACCT CGGTAGAACA AGTGTTAAGT
CAGAGTCGCT TTGCTATGGA GCGAATGACG CGGGAGCTGC GTAATGCGGT GCCAAACAGC
ATACGTTTGA CTCCTGACAC CGTATTGACC TATCAGTGTG TTGAGTTTGT GCCTATTCAG
GCCAGTGCTT CTTATGTTGA TCTTCCTATT TCACCTGCAG CGGCTAATAA CACGGGAACC
GTTTTTCCTC CCTCTCAAGG ATTAAACGTC GGAAATCAGA TGCTGGTGTA TCCGTTATTA
CCTAAACATA TCTATTCGGC AACTCCCGCA GGAACTACTG GGCGTTTATT TGATGTCGAT
GCATTTGATG CGAGCACGGG TGAGATCACA TTTGATAATT CAATCCAGTT TGCTGAAGCT
TCCCCTATTA AGCGCTACTT TATGATTAGT GGCGCTGTGA GTTACTGTTT CCAATCGGGT
GGGGAGCTAA GGCGTTATGC GAATTATGGG ATTAATGCTA ATCAGCTTAC TCCAAACAGC
AGTGGCGTAT TAATGGCGGA AAATGTTGTT AATAACTTAG CGACAGACAA ACCTATCTTG
CTAGCGCCAT CCAGTCTGGT GAATAATGCG ATTCTTCAGT TAAGGCCTAA GTTTGAGGTA
GTTAACCAAA AGTTCCAATA TCAGCATCAG GTACAGGTGA TCAATGTCCC ATAG
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| Protein sequence | MASHKNNKSY KHHKSAQGFT LVEMVTVIIV LGVLVLGVSS FVVLGTRIFV ESTSVEQVLS
QSRFAMERMT RELRNAVPNS IRLTPDTVLT YQCVEFVPIQ ASASYVDLPI SPAAANNTGT
VFPPSQGLNV GNQMLVYPLL PKHIYSATPA GTTGRLFDVD AFDASTGEIT FDNSIQFAEA
SPIKRYFMIS GAVSYCFQSG GELRRYANYG INANQLTPNS SGVLMAENVV NNLATDKPIL
LAPSSLVNNA ILQLRPKFEV VNQKFQYQHQ VQVINVP
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