| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4394 |
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| Symbol | |
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| ID | 6118749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5322774 |
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| End bp | 5324171 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635956 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001762741 |
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| Protein GI | 170728715 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000587559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA CGCGTTTGGC TTGTTTATCT CTGTGCTTGA TCTGCGGCAC TACTTTGGCT
CAGCCAATGA CTTTTAACGC GGCATGGCAG CAGCTATTGA CCGTTAGCGA TAAGCTACAG
GCCGAATCTC AAGAGGTCAT ACGAGCCCAA GCTGAGCAGC AAGCGGGTGA AGATCTTGGC
ATGCCCTCCC TAGATATCAG CGGTAGCTAC ACTCACCTTG AAAAACCTAT TGAGCTGGAT
CTTCGCGATT TAAACCCCTT AGCGTCACTC GACCCTAGCA GCTTACCGCC AGCTTTAGGT
GGTGCATTGG CCAGCATTCC AAGTTCTCTT TTCGTCACTC CTTTTACTGA ACAAGATATC
TTTAGAGCGA GTCTGCAAGC GATGTGGCCC ATCTATACCG GTGGCAAGAT CACCGCTGCT
CAAGGGATAC ACGAAGCGCA GGTTGCAGAG AAAGAGCAGC AGTTGCAGCT GGTTACACGT
GATCTTTTTA ATCTCTTAGT TGATAGGTAT TACGCAGTTT CAGTGACTGA GATGCTAATG
CAGACTCAGG GGCAGTTAGT GGCTTCGTTG ACTGAGCATG TTGATCACGC GCTTAAGTTA
GAGGAGCAAG GACAAATCGC TAAAGTGGAG CGGCTAAATG CTCAAGTGGC GCTTGAAAAT
GCTCGGGTTA GCGCTGGTAG TGCTAAGCGG CAACATGAGA TGGCTGTGAT CGCACTGTCA
CGTATGTTGC ACCAGCAGAG TGTGACGACT GCATCAGAGC TGTTTATGTT GTCAAGCCAG
CCCTCTTTGC CGCGTTTGAG CCAGCTAACC ATGACCCAGC ATCCGGCATT AAGATTACTT
GAAGCTAAAG AGGAGCAAGC CAGTGGTCTG ATTGAGGTTG AAAAAGGTCG CTATAAACCC
ACCGTTTTCC TCTACGGTAA TTACACCTTG TATGAGGACG ATAGTCTGTT CTCTAAAGTG
GAGCCAGATT GGATGGTCGG GCTTGGGGTT AAAGTGCCTT TGTTGAGCAG AGATGGCCGC
AGTGGAAAGG TAGAAGCGGC TAAAAGTGCA CTGCTGCAAG CGAGATACAC TAAAGCACAA
ACTCAGCAAG ACTTAAGCTT ACTACTAGAT CAAAGTTACC GTCAGCTTCA GCAGGCACAA
GAGGAGGTTG TGGCTCTTAA CACCTCCTTG AGTTTGGCCG AAGAGAATTT GCGTCTGCGT
GAAATAGCGT TCAATCAAGG TCTCTCTACC TCTATCGACA GAGTGGATGC CGAGTTAAAG
CTAAGTGCAG TGAAGACACA GCAACTTGGC GCTAAATACC GTTATGTTCA ATCCTATGCG
CGGCTGATGG CTATTAGTGG GCAGTTGGAT GACTTTATAG GTCGTACTAA CGGCTTAAAC
AATTTTGGAG ATAAATAA
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| Protein sequence | MKLTRLACLS LCLICGTTLA QPMTFNAAWQ QLLTVSDKLQ AESQEVIRAQ AEQQAGEDLG
MPSLDISGSY THLEKPIELD LRDLNPLASL DPSSLPPALG GALASIPSSL FVTPFTEQDI
FRASLQAMWP IYTGGKITAA QGIHEAQVAE KEQQLQLVTR DLFNLLVDRY YAVSVTEMLM
QTQGQLVASL TEHVDHALKL EEQGQIAKVE RLNAQVALEN ARVSAGSAKR QHEMAVIALS
RMLHQQSVTT ASELFMLSSQ PSLPRLSQLT MTQHPALRLL EAKEEQASGL IEVEKGRYKP
TVFLYGNYTL YEDDSLFSKV EPDWMVGLGV KVPLLSRDGR SGKVEAAKSA LLQARYTKAQ
TQQDLSLLLD QSYRQLQQAQ EEVVALNTSL SLAEENLRLR EIAFNQGLST SIDRVDAELK
LSAVKTQQLG AKYRYVQSYA RLMAISGQLD DFIGRTNGLN NFGDK
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