| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4385 |
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| Symbol | |
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| ID | 6118740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5311675 |
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| End bp | 5312685 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635947 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001762732 |
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| Protein GI | 170728706 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCA AGATAGGAAT AAACGGCTTT GGCCGCATGG GACGTTTGGC ACTGAGAGCA
GCATGGGATT GGGATGATGT TGAATTTGTA CAGATTAATG ATCCCGCTGG TGATGCAAAA
ACGTTAGCGC ACCTACTGAC ATTCGACTCG GTCCATGGTC GCTGGCAGCA TGAAGCGGTT
AACGATGGCA GTGATATTGT TATCGGTGAC AAGCGCATTG CCACCACAGC CAATAAGGCG
ATTGCAGATA CTGATTGGTC TGGCTGCGAT CTGGTTATCG AAGCCTCTGG TGTGATGAAA
ACCAAAGCGT TATTGCAAGC CTATCTTGAA CAAGGAGTTA AGCGTGTTGT AGTAACTGCT
CCTGTTAAGG AGAAGGGGGT ATTGAATATT GTGATGGGGG TGAATCATCA ATATTACGAT
AAGGCGCTAC ATCCAATTGT TACAGCAGCT TCCTGCACCA CTAACTGTTT GGCGCCAGTT
GTGAAAGTGC TGCATGAAAA GATCGGTATT AAGCATGGCT CAATGACCAC AATTCATGAC
ATCACGAATA CGCAAACCAT ATTGGATGCT CCCCATAAAG ATCTGCGTCG TGCCCGTGCG
TGCGGACTTA GCCTTATTCC GACAACGACT GGTTCGGCAA CCGCGATCAC CCATATCTTC
CCTGAACTTA AGGGAAAGCT CAATGGCCAC GCTGTGCGCA TCCCTTTGGC TAATGCCTCT
ATTACAGATT GTGTGTTTGA ACTTGAAAAA GTGACCACAG AAGCTGAGGT GAATGCTTTA
CTGAAAGAGG CGGCAGAAGG CGAGCTAAAA GATATCTTAG GCTATGAAGA GCGCCCTCTA
GTATCGGTGG ATTATAAGAC AGATCCACGC TCAAGTATTA TCGACGCTCC ATCGACCATG
GTGGTAAACG GCACACAGGT TAAGCTCTAT GTCTGGTATG ACAACGAGTG GGGGTACGCA
AACCGAACAG CCGAGTTGGC CAGAATGGTG GGGCGTTTAG ACAAGGCTTA A
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| Protein sequence | MSIKIGINGF GRMGRLALRA AWDWDDVEFV QINDPAGDAK TLAHLLTFDS VHGRWQHEAV
NDGSDIVIGD KRIATTANKA IADTDWSGCD LVIEASGVMK TKALLQAYLE QGVKRVVVTA
PVKEKGVLNI VMGVNHQYYD KALHPIVTAA SCTTNCLAPV VKVLHEKIGI KHGSMTTIHD
ITNTQTILDA PHKDLRRARA CGLSLIPTTT GSATAITHIF PELKGKLNGH AVRIPLANAS
ITDCVFELEK VTTEAEVNAL LKEAAEGELK DILGYEERPL VSVDYKTDPR SSIIDAPSTM
VVNGTQVKLY VWYDNEWGYA NRTAELARMV GRLDKA
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