Gene Swoo_4383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4383 
Symbol 
ID6118738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5308937 
End bp5310028 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content37% 
IMG OID641635945 
Producthypothetical protein 
Protein accessionYP_001762730 
Protein GI170728704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCGC TATTTTTATT TGTTTTATTT AATTTTCTGA CTGCCTGTGT GAGCTATGAA 
TCATCAATAC CTAAAGGCTA TACAGGTGAA GCGGTTACTA TATCTGACAC ATACTCTAAT
AAGACACTTT CATCCGCGCA CTTTTTTTAT GTAAAAGAGA TGAATGGTAA GCCAATGTAT
AATGCCGTAC GGAGTACAAA TGGAGCCTCA TCTGGGCAAG GAGCGAAACT TGTTGCTGTT
GGTTATAGTC GTAAAGTGCC CAAGGCCAAA TTAACATTAA AAGTCGCAGG TGAAGTTTTT
CGTGCTGCAC CTATCTTGTA TATGTTTAAC GCAGATGAAA ACTACGCGAT TGAAGGGGAG
ATAGAGTTTA CCCCAAATAA AGATGAGTTT TATTTTGTCA AAGGCGAGTT GAGTGAAACA
TACTCGGCAG TCTGGATTGA AGATATTCAT GGAAAAGTCA TCTCTAAGCT TGAAGAGGGA
GAAAAGAGTG ATAAAGCTCC TGAATTGGTA GTGAAAAGTA AGGTGTATGA CCCTGTATTT
ACTGAGAGTG TCAACGTAGA TGAACTTTCA AATATCAATT TAGGTGAATC TTCGGAACTA
GTAAAAGTGA GGTTAGGAGA GCCTACTAAG GTTTCTGTTA TTGAAGGTAA TTTCTTCAAA
AGGACTCGAG ATAAGACTGT TTTCTTCTAT GAAGATATAG CTCAGTTTGT TTTTAATGGA
GGGCCTGATT TTATTAAAAT TGCTACAGTT ATTGAGATCA TTCCTGTTGT TGGCGGAGGT
GAAAGTAATC TTCAGCGGTT AAAGAAAGAG ATGAGTTCTA CAGATCCAAA AGAGTTAAGG
GAATATGCAA AGAAATACTA TAAGAGTGAC TATATATACC CTAATGCTTT GGACGTTATT
AGCCAAAAAA TTGAAGAAGA GTTGAAGCGC CTAAGTGATC AGAATACCGA TGCTGTAGCT
TGGTTAATAA GGGTTATAGG TAGAAGTAAG AATTCAGACT ACATAGGTTT TCTTAATGAT
ATTTCCGCAC AGACTTCATC AACTAAAATT AAGCGTTACG CTAATAAAAT GATTGAAGAG
TTGGAAAAAT AA
 
Protein sequence
MRALFLFVLF NFLTACVSYE SSIPKGYTGE AVTISDTYSN KTLSSAHFFY VKEMNGKPMY 
NAVRSTNGAS SGQGAKLVAV GYSRKVPKAK LTLKVAGEVF RAAPILYMFN ADENYAIEGE
IEFTPNKDEF YFVKGELSET YSAVWIEDIH GKVISKLEEG EKSDKAPELV VKSKVYDPVF
TESVNVDELS NINLGESSEL VKVRLGEPTK VSVIEGNFFK RTRDKTVFFY EDIAQFVFNG
GPDFIKIATV IEIIPVVGGG ESNLQRLKKE MSSTDPKELR EYAKKYYKSD YIYPNALDVI
SQKIEEELKR LSDQNTDAVA WLIRVIGRSK NSDYIGFLND ISAQTSSTKI KRYANKMIEE
LEK