Gene Swoo_4278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4278 
Symbol 
ID6118633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5182263 
End bp5182865 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content34% 
IMG OID641635844 
Producthypothetical protein 
Protein accessionYP_001762629 
Protein GI170728603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATA TTGTTGATTC AGAGAAAGTA AGAGCCGAGA TCGAGGGCCA ATCAATTATT 
GAGGAATATA GCAAAATAGT GGATGCTCCA CTATTTCATG TCTCCTTAAG TAAGTTCTGT
ATTATGTTTG TCATGACATT TGGCCTTTAT CAACTTTATT GGGCATTTAA ACAGTGGCAA
GCGTTAAGAA ACTTCTATCA ATTAGATGCT TGGCCTGTGG CCCGTAGTTT TTTTTCTATC
TTTTTTACTC ACTCTCTTTT TGTTTATATA ACTGAATATA TAAAGGAAAC AGAAAGGGAA
TACAGTTGGC ATCAAACTGG TTATGCGACC CTTTATGTCT TCTTAGTTGT GGTAGGTTCC
CTTTTTTCTA ATCTTATCGA TGAGGATAGT ACTAATATAC TGCTTTGGTC CTTGACCTTT
GTCATACCTA TGATGGTAGT GTTACCTCTG TATAAGGCAC AGAAAGCAAT TAATTTTGCT
TTGGAAACAG TTAGTTATTC AAGTAATGAT AAGTTAACAT TATTTAATTG GCTTTGGATT
ATTCTTGGTA CTGCATATTG GGGGTTAATA GTATTTAGTC TTGTTATTAT TGCACTAGGT
TAA
 
Protein sequence
MEDIVDSEKV RAEIEGQSII EEYSKIVDAP LFHVSLSKFC IMFVMTFGLY QLYWAFKQWQ 
ALRNFYQLDA WPVARSFFSI FFTHSLFVYI TEYIKETERE YSWHQTGYAT LYVFLVVVGS
LFSNLIDEDS TNILLWSLTF VIPMMVVLPL YKAQKAINFA LETVSYSSND KLTLFNWLWI
ILGTAYWGLI VFSLVIIALG