| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4216 |
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| Symbol | |
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| ID | 6118571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5120212 |
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| End bp | 5120949 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635782 |
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| Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
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| Protein accession | YP_001762567 |
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| Protein GI | 170728541 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000341805 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC AAGATATCAC CTTCGGGATC CACGCTGTTG AAGCAGTACT AAAGCATAGC
CCTGAAAGAG TTATCGAGAT GTGGGTGCAG GCGGGTCGTG ATGATCAACG TCTGGCATCA
CTTCTTCAGA TGGCTGCCGA GTATGGTATT TCCGTACAAA AAGCTGCACG TAAAGTATTG
GATGACAAAT CAGACAGTGG TCAACACCAA GGGGTTTTAG CCCGTGTAAA AGCGGTGAAA
CAACTTAATG ACAACGATCT ACTTTCATTA GTTGAGAAGA CAGAAACGCC GTTTTTTTTG
ATTCTTGATG GTGTGACAGA CCCACATAAC TTAGGCGCAT GCCTACGTAA TGCTGATGCC
GCAGGTGTGC ACGGCGTTAT CGTGCCACGT GATAACTCAG TAGGTTTAAC ACCAACAGTG
AGTAAAGTCG CCTGTGGTGC TGCAGAAGTG GTGCCCCTGT TTCAGGTGAC CAATTTAGCG
CGCACCATGA AGAGTTTACA AGAGAAAGGT GTGTGGATAG TGGGTGCCGC TGGTGAAGCG
GATAGTGACC TATACAAGAC AGATCTTAAG GGCCCACTGG CGATTGCAAT GGGCGCAGAA
GATAAAGGCC TACGCCGCTT AACACGTGAG AGCTGCGACT CGATTGCCTC TATCCCTATG
GCTGGATCTG TTTCAAGCTT GAACGTTTCG GTTGCAACAG GTATCTGTTT GTTTGAGGCT
GTACGCCAGC GTTTATAG
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| Protein sequence | MKKQDITFGI HAVEAVLKHS PERVIEMWVQ AGRDDQRLAS LLQMAAEYGI SVQKAARKVL
DDKSDSGQHQ GVLARVKAVK QLNDNDLLSL VEKTETPFFL ILDGVTDPHN LGACLRNADA
AGVHGVIVPR DNSVGLTPTV SKVACGAAEV VPLFQVTNLA RTMKSLQEKG VWIVGAAGEA
DSDLYKTDLK GPLAIAMGAE DKGLRRLTRE SCDSIASIPM AGSVSSLNVS VATGICLFEA
VRQRL
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