Gene Swoo_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4214 
Symbol 
ID6118569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5117730 
End bp5119055 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content46% 
IMG OID641635780 
Producthypothetical protein 
Protein accessionYP_001762565 
Protein GI170728539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000434737 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGAGTC AAGTGCAAGA GACTAAAGGA AGCTTAGTAA GGCGAATTGG CCGTCGCAAT 
ATCATCTTAA TTTCGGCATT TGTTACCGTA TTAGTCGTGA TTGCGACCTT AATTTCGCAG
ATGATCGCGT GGAATGAAGC CGATGAACGA TTGGTTCATC AATCGGCGTT TACCGGTAAC
CTCACTGTGA TTAATCAGGC TGGCCCCTAT TTTAAAGCCT TTGGTACTGT TTCAGCTTAT
AACAAGGTTA TCTCGATTAA CTTTACGGGT AATAGCGCGG CTAAGGCGAG TGCCTTGGTG
CCATTAATTC CTATCCGCTT TCTTGATACA ACGACTGGTG ATGCAAGAGG GGTGGCTCGC
TTTAGGCTAC CAGGTAATGT GCCTGCTACT GAGTCGGGAC AGTTAAGAGG GCTACTTAAA
ATTCATGAGG AGTTTGGCTC ACAAGAAACA TTAGTTTCGA ACCTGCTACT GCGTGCAACC
ACAGAGAATG TAAAAGCATC AGCCAGAATG ATGTCGGTTG AGCAGCACTA CTCAGGTGGT
AATGGTCAAC TAAGTCAAGA TTTCTCCGAT CAGCTAGTGA ACGGTATTTT TGTTACTGAG
CAGATATTTG GTACCAGTAG CAATGAGAAA TCTGAGGAGC TGAGTAATCT AAGTAAGCAG
CAGCGTGTCA CGATTAAGAT AAAAGAGGGC AGCAACGGCA AGAAGCTACG TAATGCACCG
ATTTTAGGAG CTTATGGGAT CACAGTTGTT GATGCGAGTA TTATCGATAT CGACTACGAG
AGTAAAGTGA ACTCTAGGCT TGAAGCGCAA AAACAAGCTG CAGCAGATGA AGCGCTGGCA
AGGCAAAATC TGAAGAAGGC TGAGCAGCAA GCGCGCACTG AAGTGGCACT GGGTGAGCAG
GCTATCGCTA AGCAGAGAGC AGAATCTGAA AAGCTGAAGA TTAAGGAGCA GATCGATGCT
GAGAGGGTTA AGGCTAATGC GATTATCTCG GCCCAGCAAC GTGTTGAAGT AAAAGCGCAA
TTAGCGTTAG AGCAAGCCGA GATCCTTAAG CAGCAGCGCC TCGAAGCGAT GGGGATGGAT
GTACTCGCTG AAGCGCGTCA ACGTGCGAAG TCTGCTGCAC TGGATCCTAA ATATGTGTTC
GATGAAACAT TAAAGGCTGA GATAAAAATT CAGACTGCGC TGTTTAATAG CTTAGGCAAT
AGCCGTTTGG TGCCTGAGAT CATGATAGGT GGTGGACAGG GTGAGCAGAG TAATGGCTCT
GAGTTTATGC GCTTATTGGC GGCCGATGCT GCACTTAACC TTAAAAAGCG TTTAGAGAAA
AAGTAA
 
Protein sequence
MESQVQETKG SLVRRIGRRN IILISAFVTV LVVIATLISQ MIAWNEADER LVHQSAFTGN 
LTVINQAGPY FKAFGTVSAY NKVISINFTG NSAAKASALV PLIPIRFLDT TTGDARGVAR
FRLPGNVPAT ESGQLRGLLK IHEEFGSQET LVSNLLLRAT TENVKASARM MSVEQHYSGG
NGQLSQDFSD QLVNGIFVTE QIFGTSSNEK SEELSNLSKQ QRVTIKIKEG SNGKKLRNAP
ILGAYGITVV DASIIDIDYE SKVNSRLEAQ KQAAADEALA RQNLKKAEQQ ARTEVALGEQ
AIAKQRAESE KLKIKEQIDA ERVKANAIIS AQQRVEVKAQ LALEQAEILK QQRLEAMGMD
VLAEARQRAK SAALDPKYVF DETLKAEIKI QTALFNSLGN SRLVPEIMIG GGQGEQSNGS
EFMRLLAADA ALNLKKRLEK K