Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4214 |
Symbol | |
ID | 6118569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5117730 |
End bp | 5119055 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635780 |
Product | hypothetical protein |
Protein accession | YP_001762565 |
Protein GI | 170728539 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000434737 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGAGTC AAGTGCAAGA GACTAAAGGA AGCTTAGTAA GGCGAATTGG CCGTCGCAAT ATCATCTTAA TTTCGGCATT TGTTACCGTA TTAGTCGTGA TTGCGACCTT AATTTCGCAG ATGATCGCGT GGAATGAAGC CGATGAACGA TTGGTTCATC AATCGGCGTT TACCGGTAAC CTCACTGTGA TTAATCAGGC TGGCCCCTAT TTTAAAGCCT TTGGTACTGT TTCAGCTTAT AACAAGGTTA TCTCGATTAA CTTTACGGGT AATAGCGCGG CTAAGGCGAG TGCCTTGGTG CCATTAATTC CTATCCGCTT TCTTGATACA ACGACTGGTG ATGCAAGAGG GGTGGCTCGC TTTAGGCTAC CAGGTAATGT GCCTGCTACT GAGTCGGGAC AGTTAAGAGG GCTACTTAAA ATTCATGAGG AGTTTGGCTC ACAAGAAACA TTAGTTTCGA ACCTGCTACT GCGTGCAACC ACAGAGAATG TAAAAGCATC AGCCAGAATG ATGTCGGTTG AGCAGCACTA CTCAGGTGGT AATGGTCAAC TAAGTCAAGA TTTCTCCGAT CAGCTAGTGA ACGGTATTTT TGTTACTGAG CAGATATTTG GTACCAGTAG CAATGAGAAA TCTGAGGAGC TGAGTAATCT AAGTAAGCAG CAGCGTGTCA CGATTAAGAT AAAAGAGGGC AGCAACGGCA AGAAGCTACG TAATGCACCG ATTTTAGGAG CTTATGGGAT CACAGTTGTT GATGCGAGTA TTATCGATAT CGACTACGAG AGTAAAGTGA ACTCTAGGCT TGAAGCGCAA AAACAAGCTG CAGCAGATGA AGCGCTGGCA AGGCAAAATC TGAAGAAGGC TGAGCAGCAA GCGCGCACTG AAGTGGCACT GGGTGAGCAG GCTATCGCTA AGCAGAGAGC AGAATCTGAA AAGCTGAAGA TTAAGGAGCA GATCGATGCT GAGAGGGTTA AGGCTAATGC GATTATCTCG GCCCAGCAAC GTGTTGAAGT AAAAGCGCAA TTAGCGTTAG AGCAAGCCGA GATCCTTAAG CAGCAGCGCC TCGAAGCGAT GGGGATGGAT GTACTCGCTG AAGCGCGTCA ACGTGCGAAG TCTGCTGCAC TGGATCCTAA ATATGTGTTC GATGAAACAT TAAAGGCTGA GATAAAAATT CAGACTGCGC TGTTTAATAG CTTAGGCAAT AGCCGTTTGG TGCCTGAGAT CATGATAGGT GGTGGACAGG GTGAGCAGAG TAATGGCTCT GAGTTTATGC GCTTATTGGC GGCCGATGCT GCACTTAACC TTAAAAAGCG TTTAGAGAAA AAGTAA
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Protein sequence | MESQVQETKG SLVRRIGRRN IILISAFVTV LVVIATLISQ MIAWNEADER LVHQSAFTGN LTVINQAGPY FKAFGTVSAY NKVISINFTG NSAAKASALV PLIPIRFLDT TTGDARGVAR FRLPGNVPAT ESGQLRGLLK IHEEFGSQET LVSNLLLRAT TENVKASARM MSVEQHYSGG NGQLSQDFSD QLVNGIFVTE QIFGTSSNEK SEELSNLSKQ QRVTIKIKEG SNGKKLRNAP ILGAYGITVV DASIIDIDYE SKVNSRLEAQ KQAAADEALA RQNLKKAEQQ ARTEVALGEQ AIAKQRAESE KLKIKEQIDA ERVKANAIIS AQQRVEVKAQ LALEQAEILK QQRLEAMGMD VLAEARQRAK SAALDPKYVF DETLKAEIKI QTALFNSLGN SRLVPEIMIG GGQGEQSNGS EFMRLLAADA ALNLKKRLEK K
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