Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4205 |
Symbol | |
ID | 6118560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5108784 |
End bp | 5110106 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635771 |
Product | hypothetical protein |
Protein accession | YP_001762556 |
Protein GI | 170728530 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000231794 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | TTGTTGAAAA AAATATTGAA TTACCAAGTG ATATTGGCGC TTTATTGCGC CTTTAATTTA TCGTCTACTA AAGCCGCTGA GTCAGACTCT CCAACTGCAG GTTCTGTGCT AGACCCCATT GTCGAGATTG AGCAAACTTC TTCACAATAC GATGAGAAAA GGGAGTACAA AGCTGACTTT GAGGCGGTTC CTTTTATCTT TTCTACTGAA ACCTTAAGTA CCACCGTAGG TGGTGCTGGA GTACTTAAAC ACGCTGGGCA GGTGCAAGCC TCTTTATTGG GAATTGGCCT CTACAGTAAG AATGACAGTT GGCTGACATA CTTAGGTGCG TATAACTATC AACTGCCTAG TTTAGAGCGG TGGCTTTTTT CTGCTGAGTA CTATAGAGCG AGTTATAAAC AAGGGATCTA TTTTGTCCCT AATGGTGAAG AACCCCACCA TAATGTGGGA TTGCCGACTG ATAAGGTGGT CACTGTTGGC GATGAGACCT ATGCCAAGTT ACATCTTAAG TATGTGTTGC CATGGGGCAG AGGCTCACAA GGGGCGGCCA GAAGTCTGCT TGCTAAAGGG GGAGCTATTA GCTGGGATCC TAGAGAGTCA GGTGTGTCGA GTATTACCTT AACTCCTTTT ATCCAAACCC AAGACCTTAC AGGCTTTGAT GATTTGCCAA CCAAGGCACA GGGGCTCAAG TTAAAGCTGG ATTGGGATAA CAGAGACAAT GGTAAAAATA GCCATAGCGG CGGTCGCACC AGTTTTACCC TGAGTCGCGA TTTTGGTGGG GACTCTGGCA GAAACGCCGA TGATCGTCAA AGCTGGACAA CTTGGGAGTT TGAGCAGAGT GCTTTTCTTT CGATAGGTAA TAATAGCTGG TTCGAGCAGC AAACATTAGC GCTCAACCTT TATTTAGCCG ACACTCCAAC TTGGAATGAT GGAGATTATA TAACTGGTGA GTATCATCGA CCCCCGGCTT TTGCTGGGAT CAGCTTAGGT GGTTTCGATA GTTTGCGGGG GTATTCTAGT GATGAATTTG TAGGGCGCAG TGCAGTGCTT TACTCCGCTG AATATAGAGT GCAGCCGAAG TGGCAACCGC TACAAAGCTT ACCTGTATTT AATCTATATA ATGTTCCTTG GTGGCAGTGG GTTGTGTTTG CAGAAACTGG ACAAGTGAGT GACAAGTTTA GCTTTAATGA GCTACATCAA GATATGAAGT GGACTTTAGG AGCGGGGGTT CGATTTGAAG TTGAAAGTGT GGTGGTGAGA ACTGAGTTTG CCTATAGCGG TGAGGAAAGC CAGTTTTGGG TCATGGTAAA TCAACCCTTT TAA
|
Protein sequence | MLKKILNYQV ILALYCAFNL SSTKAAESDS PTAGSVLDPI VEIEQTSSQY DEKREYKADF EAVPFIFSTE TLSTTVGGAG VLKHAGQVQA SLLGIGLYSK NDSWLTYLGA YNYQLPSLER WLFSAEYYRA SYKQGIYFVP NGEEPHHNVG LPTDKVVTVG DETYAKLHLK YVLPWGRGSQ GAARSLLAKG GAISWDPRES GVSSITLTPF IQTQDLTGFD DLPTKAQGLK LKLDWDNRDN GKNSHSGGRT SFTLSRDFGG DSGRNADDRQ SWTTWEFEQS AFLSIGNNSW FEQQTLALNL YLADTPTWND GDYITGEYHR PPAFAGISLG GFDSLRGYSS DEFVGRSAVL YSAEYRVQPK WQPLQSLPVF NLYNVPWWQW VVFAETGQVS DKFSFNELHQ DMKWTLGAGV RFEVESVVVR TEFAYSGEES QFWVMVNQPF
|
| |