Gene Swoo_4205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4205 
Symbol 
ID6118560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5108784 
End bp5110106 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content45% 
IMG OID641635771 
Producthypothetical protein 
Protein accessionYP_001762556 
Protein GI170728530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000231794 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGTTGAAAA AAATATTGAA TTACCAAGTG ATATTGGCGC TTTATTGCGC CTTTAATTTA 
TCGTCTACTA AAGCCGCTGA GTCAGACTCT CCAACTGCAG GTTCTGTGCT AGACCCCATT
GTCGAGATTG AGCAAACTTC TTCACAATAC GATGAGAAAA GGGAGTACAA AGCTGACTTT
GAGGCGGTTC CTTTTATCTT TTCTACTGAA ACCTTAAGTA CCACCGTAGG TGGTGCTGGA
GTACTTAAAC ACGCTGGGCA GGTGCAAGCC TCTTTATTGG GAATTGGCCT CTACAGTAAG
AATGACAGTT GGCTGACATA CTTAGGTGCG TATAACTATC AACTGCCTAG TTTAGAGCGG
TGGCTTTTTT CTGCTGAGTA CTATAGAGCG AGTTATAAAC AAGGGATCTA TTTTGTCCCT
AATGGTGAAG AACCCCACCA TAATGTGGGA TTGCCGACTG ATAAGGTGGT CACTGTTGGC
GATGAGACCT ATGCCAAGTT ACATCTTAAG TATGTGTTGC CATGGGGCAG AGGCTCACAA
GGGGCGGCCA GAAGTCTGCT TGCTAAAGGG GGAGCTATTA GCTGGGATCC TAGAGAGTCA
GGTGTGTCGA GTATTACCTT AACTCCTTTT ATCCAAACCC AAGACCTTAC AGGCTTTGAT
GATTTGCCAA CCAAGGCACA GGGGCTCAAG TTAAAGCTGG ATTGGGATAA CAGAGACAAT
GGTAAAAATA GCCATAGCGG CGGTCGCACC AGTTTTACCC TGAGTCGCGA TTTTGGTGGG
GACTCTGGCA GAAACGCCGA TGATCGTCAA AGCTGGACAA CTTGGGAGTT TGAGCAGAGT
GCTTTTCTTT CGATAGGTAA TAATAGCTGG TTCGAGCAGC AAACATTAGC GCTCAACCTT
TATTTAGCCG ACACTCCAAC TTGGAATGAT GGAGATTATA TAACTGGTGA GTATCATCGA
CCCCCGGCTT TTGCTGGGAT CAGCTTAGGT GGTTTCGATA GTTTGCGGGG GTATTCTAGT
GATGAATTTG TAGGGCGCAG TGCAGTGCTT TACTCCGCTG AATATAGAGT GCAGCCGAAG
TGGCAACCGC TACAAAGCTT ACCTGTATTT AATCTATATA ATGTTCCTTG GTGGCAGTGG
GTTGTGTTTG CAGAAACTGG ACAAGTGAGT GACAAGTTTA GCTTTAATGA GCTACATCAA
GATATGAAGT GGACTTTAGG AGCGGGGGTT CGATTTGAAG TTGAAAGTGT GGTGGTGAGA
ACTGAGTTTG CCTATAGCGG TGAGGAAAGC CAGTTTTGGG TCATGGTAAA TCAACCCTTT
TAA
 
Protein sequence
MLKKILNYQV ILALYCAFNL SSTKAAESDS PTAGSVLDPI VEIEQTSSQY DEKREYKADF 
EAVPFIFSTE TLSTTVGGAG VLKHAGQVQA SLLGIGLYSK NDSWLTYLGA YNYQLPSLER
WLFSAEYYRA SYKQGIYFVP NGEEPHHNVG LPTDKVVTVG DETYAKLHLK YVLPWGRGSQ
GAARSLLAKG GAISWDPRES GVSSITLTPF IQTQDLTGFD DLPTKAQGLK LKLDWDNRDN
GKNSHSGGRT SFTLSRDFGG DSGRNADDRQ SWTTWEFEQS AFLSIGNNSW FEQQTLALNL
YLADTPTWND GDYITGEYHR PPAFAGISLG GFDSLRGYSS DEFVGRSAVL YSAEYRVQPK
WQPLQSLPVF NLYNVPWWQW VVFAETGQVS DKFSFNELHQ DMKWTLGAGV RFEVESVVVR
TEFAYSGEES QFWVMVNQPF