| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4201 |
|---|
| Symbol | |
|---|
| ID | 6118556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5105848 |
|---|
| End bp | 5106069 |
|---|
| Gene Length | 222 bp |
|---|
| Protein Length | 73 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641635767 |
|---|
| Product | phage shock protein C, PspC |
|---|
| Protein accession | YP_001762552 |
|---|
| Protein GI | 170728526 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.150458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000256968 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTT TAGATTCGTT AAGTGGCTAT ATTTCAAGGA TGAAGCAGCC CGATACGCTA
GTATGTGGTA TGGCAGCCAT GATGGCTGAT AAGTTTGATT GGTCATGCTT GTGGACGAGG
GTAGTTTGGG CATTAGCTGT GATCATGAAT CCTGGTTTGG GACTGTTAGT CTACTTTGTA
TTAGCTTTGG TATTACCTAA ATGGCAAAAA AGTGGCTACT GA
|
|---|
| Protein sequence | MSSLDSLSGY ISRMKQPDTL VCGMAAMMAD KFDWSCLWTR VVWALAVIMN PGLGLLVYFV
LALVLPKWQK SGY
|
|---|
| |