Gene Swoo_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4153 
Symbol 
ID6118504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5053576 
End bp5054247 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content43% 
IMG OID641635715 
Productthiopurine S-methyltransferase 
Protein accessionYP_001762504 
Protein GI170728478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0453346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.132491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG ATTTTTGGCA CAGTAAGTGG AATGCAGAAC AGATAGGCTT TCATTTAAAT 
GAAGTGAATC CTTTGCTGAT TAAATACTGG CCCGCGCTTG ATTTAGCGCC GAATAGTCAG
GTATTTGTTC CACTATGCGG TAAAAGTTTG GATCTTTGCT ATCTGGCTGA GTTAGGCCAT
AAAGTAGTGG GGTGTGAGCT CAATCAAACA GCTGTAGAGC AGTTTTTTGC TGAGAACAGT
TTACCCCACT TGATGACCCC CGCTAAAGAA TCCATTAGTG AGCTTAATCG ATTTGATGCC
AGCGACATTA CACTGTATCA AGGAGATCTT TTCTCTTTAA CGCCCGAAGA GCTATCTGGA
GTGGATGCCT TTTATGATAG AGCCGCTTTG ATTGCTTGGC CAGAGTCGAT GCGTTTAGCC
TATGTCGAAA AGCTTATTGA GCTACTACCC CCAAAAAGTA TGGGTCTGCT TGTTACTTTG
GATTATCCAC AAGAAGCGCT AAAAGGGCCA CCCTTTGCCG TTTCTAATGA TTGGGTAATG
GCTAATATGG CCGATTATTT TGAGCTTGAG CTCCTTAGCA GTGAAGATGT GTTAAACGAG
AACCCACGCT TTGTAAATAA GCAGGTACCT TGGCTAACAG AGTCTGTTTA TCAGCTTAAA
AGAAGAGGCT AG
 
Protein sequence
MEPDFWHSKW NAEQIGFHLN EVNPLLIKYW PALDLAPNSQ VFVPLCGKSL DLCYLAELGH 
KVVGCELNQT AVEQFFAENS LPHLMTPAKE SISELNRFDA SDITLYQGDL FSLTPEELSG
VDAFYDRAAL IAWPESMRLA YVEKLIELLP PKSMGLLVTL DYPQEALKGP PFAVSNDWVM
ANMADYFELE LLSSEDVLNE NPRFVNKQVP WLTESVYQLK RRG