| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4071 |
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| Symbol | |
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| ID | 6118421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4942680 |
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| End bp | 4943981 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635632 |
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| Product | hypothetical protein |
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| Protein accession | YP_001762422 |
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| Protein GI | 170728396 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTCT ATTATCTCGA TTTAGCCTGG CGCAGCATTA AAAAAACGCC GCTATTGTCT
CTGTTGATGG TACTGGCGAT CTCTATCGGT ATCGGCACTA CTATCACTAG CCTAAATATC
TATCAGATGG CCAACATCAA TCCAGCTGGT GATCGTTCAA GCCAGCTGTA TGAGGTGCGC
TTGATGAGCC AAGGGCTCGA CTCTTGGGAG GAGATCAATG AACAGATAAC CTATCAAGAT
AGTTTTAATC TGCGAAAAAA CAGTATTGCT ACCCGCCAAA GCCCTATGTT TCGAACTGGG
ATGGCAGTAC AAACTGACGA TGACAATTTC GTGCCCATCC TAGAGGGTGC ACGTGTAGCA
GATAGTGATT TCTTTGGCCT GTTCTCTGTG GAGTTTCTTT ACGGTAGCAG TTGGGGTAAG
CAGGTCGATA TCGATCCCGC CTATCAAGTG GTGATCCGAG AAGATCTTAA CAAAGAGGTA
TTTGGCGGTG AAAACAGTGT TGGCCGCACT ATCTATCTTA ACCAGAAGCC CTACCAGATT
GTAGGGGTGA TCAAGTACTG GAACCCAAGT CCTAAATATT ACGACGTTAA CAACGGCGCT
TTTAATGATG CTGAGCGTAT GTTCGTTCCC TTTTCTCTAG CGCCTATTGA GGAGTTTGAG
AGTTGGGGTA ATAACCAAAG TTGGAAGCGC GAAGATATTG TGACCTATGC CGACAGACTT
GCTTCAGAAA CTCACTGGAA CCAATACTGG GTCGAGCTTA ATACCCCTGA GCAGGTAAAA
GAGTATCAGC TCTGGCTTAG CAACTATATC GAGCAGCAAA AACTGATTGG CCGTTTTGAG
ATGCCTGAAG CTAAAGCTGA CCTCTCTGAT GTGGCCACTT GGCTTAAGGT CAACAACGTT
GTGCCTGAAG ATAATAAGGT ATTGGTAGGT CTAAGCGTAC TGTTCTTAAT TGTCTGTTTA
GTCAATATGT TAGGCCTACT GTTGGCCAAG TTCCTTAAAC GTGCCCCAGA GGTCGGGGTT
CGCCGCGCTA TTGGTGCTAG CAGAGCACAA ATCTTTGCCC AGCATATGGT AGAGGTGGGA
GTGATTGGCT TTTTTGGTGG CGTGATTGGT TTACTTTGGG CTTGGGGCTC GTTATCGATT
TTGTCAGCGC ACTTCAAACT TGAAGAAGCA TTAACTCAAC TTGGAATGAG TATGTGGGTG
CTAGCCCCTG GTGTGGCTAT TGCGAGTGCA TTGATTGCAG GGCTTTATCC CGCTTGGCGG
ATCTGCTCTA CCAACCCCAG TGTTCACCTG AAGAGTCAGT AG
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| Protein sequence | MFFYYLDLAW RSIKKTPLLS LLMVLAISIG IGTTITSLNI YQMANINPAG DRSSQLYEVR
LMSQGLDSWE EINEQITYQD SFNLRKNSIA TRQSPMFRTG MAVQTDDDNF VPILEGARVA
DSDFFGLFSV EFLYGSSWGK QVDIDPAYQV VIREDLNKEV FGGENSVGRT IYLNQKPYQI
VGVIKYWNPS PKYYDVNNGA FNDAERMFVP FSLAPIEEFE SWGNNQSWKR EDIVTYADRL
ASETHWNQYW VELNTPEQVK EYQLWLSNYI EQQKLIGRFE MPEAKADLSD VATWLKVNNV
VPEDNKVLVG LSVLFLIVCL VNMLGLLLAK FLKRAPEVGV RRAIGASRAQ IFAQHMVEVG
VIGFFGGVIG LLWAWGSLSI LSAHFKLEEA LTQLGMSMWV LAPGVAIASA LIAGLYPAWR
ICSTNPSVHL KSQ
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