| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3935 |
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| Symbol | |
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| ID | 6118284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4795040 |
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| End bp | 4795651 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635496 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001762287 |
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| Protein GI | 170728261 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAT CTATTTTTAT GACCCTTTTT ATGGTGTCAT TACTCGGTGC TATGTCACCA
GGCCAGTCGG TCATTATGGT TGCAAGAAAT ACCCTTGCTG GTGGTAGAGC GCAAGGTATC
ATTACAGCTT GTGCCCACTC TATCGGAGTT GGACTCTATG CTGGACTCTC TTTAGCAGGA
CTTGCCCTAG TATTAAAAAA CTCCCCTTTG TTTTATAACA CCATCACTTA CCTAGGTGCT
GCATATCTGG CTTGGCTAGG TATTTGTTCT TTACGATCAA AAGGTGGAAT AACCGATAAA
CTAAATAGCG GCAAACAAAT GAGCCTTTAT CAAGCTGCAA GGAGTGGCTT TGTTATCTCT
ATACTTAACC CTAAAATCAT CATTTTCTAT CTCGCATTGT TTAGTCAATT CGTGGAAAAC
GCAGATAGTA TGGTTAATCG AATAATTATT GTCACAACAC CGACGGTTCT TGATGCAGTC
TGGTACATAT TTATCGCCTG CATGTTATCA AAACCAACAA CATTGATAAG ACTAAGGCAG
CACGCTCAAA CAATCGATAA GGTATCAGGC ATGCTACTGC TCCTCTTAGC TGGGCGCATC
CTAATCAGCT AA
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| Protein sequence | MSISIFMTLF MVSLLGAMSP GQSVIMVARN TLAGGRAQGI ITACAHSIGV GLYAGLSLAG
LALVLKNSPL FYNTITYLGA AYLAWLGICS LRSKGGITDK LNSGKQMSLY QAARSGFVIS
ILNPKIIIFY LALFSQFVEN ADSMVNRIII VTTPTVLDAV WYIFIACMLS KPTTLIRLRQ
HAQTIDKVSG MLLLLLAGRI LIS
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