| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3932 |
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| Symbol | |
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| ID | 6118281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4793241 |
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| End bp | 4794137 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635494 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762285 |
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| Protein GI | 170728259 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGT ATGAATCTAT GCAGCTATTT ATTCACACAT CTCGGTCAGG AAGTTTTACG
GCTGCAGCTG ATGAGCTGAA TCTGACACAA AGTGCTGTTA GCAAAAAAAT AGCTTGGTTA
GAAAAAAAAT TAGGCTTTAC GCTTTTTCAC CGAAACAGTC GCAAAATCCA ATTAACAACC
CAAGGGAAAA ACTACTTAAG TTATTGCAAG CAGGCACTCG ATGAAATGAC CTATATAGAG
TCTCAGTTGA AAGGCGAGCT AAACGCAGTA ATAGGTGAAC TTAGGCTGTC AGTGCCAAGT
GCGATGGCGA CTCAAATTCT AGCGAAACCA ATCAGTGACT TCATGGCTAT CCACCCACAG
CTAACAGTTA ATATCTCTGT CAACGATCGT CAAGTTGATT TAATCGAAAG TAAGGTAGAT
ATTGCGATCC GAGTTGCAAC CCTCCCAGAC TCAGGCTACA AAGCTCGGTT TCTTTTCAAT
AACCAAAGCA TCATGTTTGC CTCTCCAAGT TACCTAAAAG ATAAAGGAAC CCCTAAAACT
GCTGAGGAGT TAACCACACA TCAATGCCTT GTCTACTCTC TAAAGGCACC ATCGAATATA
TGGTCACTAA CCGATAGTAA TAACACTACA GTCAAAGTTA AGGTAAAGGA AAGGGTTAAA
AGTGATAGCG CCGAAATGCT TTTAAAGATG TCCCTTATGG GACACGGCAT ATCAGCCCTA
CCCAACTGGA TGGTAAAACA ACACATAGAT AATGGGAGAC TCACGGCAAT ATTGGTTGAT
TACCAATCAA TGAGCTTACC CATGTACGCC GTATTTAAAG CCGATGGCTA CCAGCCATAC
AGAATTCAGG CATTTGTAAA CTTTTTGGCC GAATACTTCC AAGATAATAT CGATTAA
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| Protein sequence | MDKYESMQLF IHTSRSGSFT AAADELNLTQ SAVSKKIAWL EKKLGFTLFH RNSRKIQLTT
QGKNYLSYCK QALDEMTYIE SQLKGELNAV IGELRLSVPS AMATQILAKP ISDFMAIHPQ
LTVNISVNDR QVDLIESKVD IAIRVATLPD SGYKARFLFN NQSIMFASPS YLKDKGTPKT
AEELTTHQCL VYSLKAPSNI WSLTDSNNTT VKVKVKERVK SDSAEMLLKM SLMGHGISAL
PNWMVKQHID NGRLTAILVD YQSMSLPMYA VFKADGYQPY RIQAFVNFLA EYFQDNID
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