| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3929 |
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| Symbol | |
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| ID | 6118278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4790473 |
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| End bp | 4792068 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635491 |
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| Product | deoxyribodipyrimidine photolyase-related protein |
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| Protein accession | YP_001762282 |
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| Protein GI | 170728256 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTAT TAGGAAGTCA ACCAACACAA AAACTTAGAC TTATTCTCGG TGATCAACTT
AACGCCGAGC ACTCTTGGTA TAAAGATAAG TCTCCCAACA CCTTATATTT GATTGCGGAG
CTATATCAAG AAACAAACTA CACCCGGCAT CATATCCAAA AAGTGTCAGC CTTTTTTGCA
GCAATGGCAG CCTTTGCTAA TGCACTTGAG CAAGCAGGGC ATAGTGTATT GCACCTTACA
TTAGATGAAA CAGCCCAATA TCAAGACTTA CCTACACTAT TAAACGAGCT TATTGATCGT
CACCAAATTG AAGAGTTTGA ATACCAGCTC CCCGATGAAT ATCGCTTAAG ACAGCAGCTA
TCTCTGTTTT CTCGCTCTAT AGATATAAGT GTTAAAACCT ATGAAAGTGA ACATTTCTAT
TTGTCTGATG CTGAATTAGT TGATTACTTT AAAGTGGGTA AAAAGCACCG TTTAGAACCG
TTTTATCGAA AATTGAGAGC CAGATTTAAC TTGTTAATGG AGCAAGGAAG CCCTCTTGGT
GGGAAATGGA ATTTTGATGC CGATAATCGA CAAAAAATCA AAGTGACAGA CTTTTACGAT
GTGCCAACTC CCCTATTATT CGCTAATGAT GTCAGCACTA TTTTACAACG AGTTGAGCGC
CATAACGTTG CGACAATAGG GGTTGTCCAA GCTAACTTAC TCTGGCCAAT TACGCGTCAT
CAAGCTAATA AACTCCTTGA ACATTTTTGC CGATATTGCT TAGTCAGATT TGGGCAGTTT
CAAGATGCGA TGACAGCTAA ACTAGATCTT AAGTTAGGTG CATTAAGCGA AGACAGGCAG
TGGACCTTAT ATCACTCACG ATTATCATTT GCGCTCAACG CCAAGCTGCT CAGTCCTAAA
CATGTTATTG ATACAGCCAT TACCGCTTAT CAGGCAGCAA AAGGAGAGAT AACTTTAGCG
CAAATAGAGG GTTTTGTAAG ACAAATACTA GGCTGGCGAG AGTTCGTTAG AGGCGTGTAT
TGGGCAAACA TGCCCGAGTA TGCAGAACTT AATAGATTGT CAGCGACGCG CGCGCTCCCC
ACTTGGTTTT GGAGTGGCGA CACTAAAATG AACTGTTTAC ATCATGCCAT TAAGCAATCG
CTAGAGTATT CCTACGCTCA CCACATCCAA CGCTTAATGG TGACAGGCAA TTTTTGTTTA
ATTTCAGGTG TAGCTCCTGA CCAAGTTGAT GATTGGTACT TAGGGGTTTA TATCGATGCT
ATTGAGTGGG TCGAGATGCC AAATACCCGA GGAATGAGCC AATTTGCCGA TGGTGGAATA
GTAGGTTCTA AAGCCTATGC TGCCAGTGGA AACTATATCA ATAAAATGAG TGATTACTGC
ACAAACTGTC ACTATCAGGT AAAACAAAGT CACACTAACA AGGCCTGTCC TCTCAACGCT
TTGTACTGGC GGTTTATGGC TCAACACTTC GATGATTTTA GTACCAATCC GCGAACTAAA
ATGGTTTATG CCAATTGGTT AAAAAAGCCC GTAGAGGATA GAGAGTTAAT ATTATCCCAT
GCAGAAAATC TACTCTGCCA TATCGAAGAG CTATAA
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| Protein sequence | MSLLGSQPTQ KLRLILGDQL NAEHSWYKDK SPNTLYLIAE LYQETNYTRH HIQKVSAFFA
AMAAFANALE QAGHSVLHLT LDETAQYQDL PTLLNELIDR HQIEEFEYQL PDEYRLRQQL
SLFSRSIDIS VKTYESEHFY LSDAELVDYF KVGKKHRLEP FYRKLRARFN LLMEQGSPLG
GKWNFDADNR QKIKVTDFYD VPTPLLFAND VSTILQRVER HNVATIGVVQ ANLLWPITRH
QANKLLEHFC RYCLVRFGQF QDAMTAKLDL KLGALSEDRQ WTLYHSRLSF ALNAKLLSPK
HVIDTAITAY QAAKGEITLA QIEGFVRQIL GWREFVRGVY WANMPEYAEL NRLSATRALP
TWFWSGDTKM NCLHHAIKQS LEYSYAHHIQ RLMVTGNFCL ISGVAPDQVD DWYLGVYIDA
IEWVEMPNTR GMSQFADGGI VGSKAYAASG NYINKMSDYC TNCHYQVKQS HTNKACPLNA
LYWRFMAQHF DDFSTNPRTK MVYANWLKKP VEDRELILSH AENLLCHIEE L
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