| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3902 |
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| Symbol | |
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| ID | 6118251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4754618 |
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| End bp | 4755274 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635464 |
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| Product | peptide chain release factor H |
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| Protein accession | YP_001762255 |
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| Protein GI | 170728229 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR03072] putative peptide chain release factor H |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0189567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTTAT TGCAACTGTC TGCTGGTCAA GGCCCTGCTG CGTGCTGTAA AGCGATTGGT
TTAGCGTTGA AGGAGATTGA GAAGCAGTGC AGAGAAAAAG GTGTTGCTTT TGACCTTATT
GAAGCGATTG AAACAAAGGA GCGATTTTGC TTTAAGTCCG TGCTGCTTCA GCTTGAGTCA
AAGCAGTCAG TGTTGGGGGA AGATGACTTA GCTAAACAGC TAGCTAAGTC ATGGCAAGGA
GCAATGTTGT GGATCTGTCA AAGCCCCTTT CAGCTTGAAA AGAATAGAGT TAAAAATAAG
CGAAAGAACT GGTTTTTCAG TGGGCAGATG TATGAGTTTA ATGAAACTGA ATTAGACAAA
GAGGTTAGCT TTCAAACATG CAGAGCGTCA GGCGCAGGTG GGCAGCATGT TAACACCACG
GATTCTGCCG TGCGTGCGAT TCATGTTGCA ACTGGTATTT CAGTAAGAGT TGAGAGTGAA
AGGAGCCAGC ATGCAAATAA ACGTCTTGCC CGTGCTTTGC TATTCCAAAA GCTTGAGTCG
ACCAAGGTTG AACAGATGTC ATTGCAAGAA AAAGCCCGTT GGCAGCAGCA TTGGGAAGTT
GAGCGTGGTA ACCCAGTTAA AACATTTAAA GGAGAAAAAT TCACCCTTGT TAATTGA
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| Protein sequence | MILLQLSAGQ GPAACCKAIG LALKEIEKQC REKGVAFDLI EAIETKERFC FKSVLLQLES
KQSVLGEDDL AKQLAKSWQG AMLWICQSPF QLEKNRVKNK RKNWFFSGQM YEFNETELDK
EVSFQTCRAS GAGGQHVNTT DSAVRAIHVA TGISVRVESE RSQHANKRLA RALLFQKLES
TKVEQMSLQE KARWQQHWEV ERGNPVKTFK GEKFTLVN
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