| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3871 |
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| Symbol | |
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| ID | 6118220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4716567 |
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| End bp | 4717931 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635433 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001762224 |
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| Protein GI | 170728198 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0111828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGACTT CAAAACAAAC TTCACCAAGC CATGACGTGA GCCCCCAAAA TACGGCGCCC
ACGGCCTCCT TTTTGGCTTT GGTTCCACTA TTCCTATTTT TAGCTCTATT TATCGGTGCA
GGCCTCTACT TTCAGAGCCA AGGCGTAGAC TTTGCCTTCT ACCAACTGCC AAGTGTGGTC
GCCATCTTAC CTGCGATCAT CTTTGCCCTT ATCATCTCTA AGCAGAAGTT AAACCAGAGC
ATAGAGACCT TTATCGCTGG AATAGGTCAT GCGAACATCA TCGCAATGTG TCTTATCTAT
CTGTTAGCTG GTGCTTTTGC TGCTGTCGCT AAGGCGACTG GTGGTGTGGA TGCCACTGTG
GCACTGGGTC TCTCATTAGT GCCATCTAAC CTGCTACTTC CAGGCTTCTT TGTCATCGCA
GCATTTATTG CCACCGCCAT GGGAACCTCA ATGGGTACCA TAGCCGCTGT CGCTCCTATT
GCGCTGGGTA TCGCTAATGA AGCCCAGATA GAGCTAGCTC TGATGGCTGG TGCTGTTATA
TCCGGAGCGC TATTTGGTGA TAACCTCTCT ATCATTTCAG ATACCACAAT TGCAGCAACG
CGTACTCAAG GCTGTGAGAT GAAAGATAAG TTCAAAGAGA ACCTCATCTT CGCGATTCCA
GCCTCTATCA TCACACTCGT TCTCTTTACC TTAGCGGGAC AGGGGCAAGC TGACGTTGCC
GCTCAAGAGA TCGATTTTAT CAAAGTGATC CCCTACCTAA CCATTTTGCT GCTAGCAGTT
TCAGGCTTAA ACGTATTTGT CGTACTGACT ATCGGGATCT TACTGGCGGG TATCACTGGG
CTTTTGACCA TGGATTACGG CGTGATCCAG TTTGGCCAAG ATATCTATGC GGGCTTTGGT
AATATGCAGG AGATCTTTAT CCTCTCTATG TTAGTGGGAG GACTGGCAGC ACTGATGCAG
CAGCAAGGTG GATTGGCCTT CGTTAGCAAG CAGATAGAGA AGCTTATCGC TAAGTTCTCT
AAAGCTAAGG GCGGCGCATC GACTCGCGCA TCAGAACTCG GCATGGCGGG CATAGTGGCA
CTAACAAACA CCTGTGTGGC TAACAACACA GTCTCTATTG TCGTTACTGG TGATATTGCA
AAAGAGTTGG CTCTGAAGCA TCAGGTCACA CCTAAACGTG CTGCCAGCAT CTTAGATATC
TTCTCCTGTA TCATACAGGG ACTTATCCCC TACGGTGCTC AGGCTCTACT TATCGCTTCA
GTTTTCAGTA TCTCGCCGAT AGAAGCGGTC ACCCACGCTT GGTACTGCAT GATCTTAGCT
GTAGTCGCTG TTTCTATTGT GATTTTACGT AAACGAGTCG CTTAA
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| Protein sequence | MTTSKQTSPS HDVSPQNTAP TASFLALVPL FLFLALFIGA GLYFQSQGVD FAFYQLPSVV
AILPAIIFAL IISKQKLNQS IETFIAGIGH ANIIAMCLIY LLAGAFAAVA KATGGVDATV
ALGLSLVPSN LLLPGFFVIA AFIATAMGTS MGTIAAVAPI ALGIANEAQI ELALMAGAVI
SGALFGDNLS IISDTTIAAT RTQGCEMKDK FKENLIFAIP ASIITLVLFT LAGQGQADVA
AQEIDFIKVI PYLTILLLAV SGLNVFVVLT IGILLAGITG LLTMDYGVIQ FGQDIYAGFG
NMQEIFILSM LVGGLAALMQ QQGGLAFVSK QIEKLIAKFS KAKGGASTRA SELGMAGIVA
LTNTCVANNT VSIVVTGDIA KELALKHQVT PKRAASILDI FSCIIQGLIP YGAQALLIAS
VFSISPIEAV THAWYCMILA VVAVSIVILR KRVA
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