| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3837 |
|---|
| Symbol | |
|---|
| ID | 6118186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 4682352 |
|---|
| End bp | 4683926 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641635400 |
|---|
| Product | tryptophan halogenase |
|---|
| Protein accession | YP_001762191 |
|---|
| Protein GI | 170728165 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAC CAACACAAAA AATCGTGATT GTCGGCGGTG GAACCGCAGG CTGGATCACA
GCAGGTTGGC TAGCGGCCCA TCACAAAGTC ACCTCGGGTA GCCCCGTTGA GGTGATCTTG
GTTGAATCAC CTGATACTCC CTCCATTGGC GTAGGGGAAG GCACTTGGCC TACCATGCGC
AATAGCTTGA TAAAAATGGG CATTAGTGAA ACAGACTTTA TTCGCGAGTG TGACGCCACT
TTCAAGCAAG GAGCCAAATT TGCCAAGTGG GTCGATGGCT CAGATGATGA TTTCTACTAC
CACCCTCTCG TGCTCCCCCA AGGCTTTACT CAGCACGACC TCGCCCCCTA CTGGGCATCG
CTACACGCAG AATCAAATGA GGAAAGTAAA CACTCTTTCT CCAACGCAGT TTGCTTTCAA
GAGAGCGTCT GTGAGCAGGG CTTAGCCCCT AAAACCATAC GCACCGCTGA ATACTCAGAT
GTAGCCAACT ACGCTTATCA TCTCGATGCA GGTAAATTCT CTCAATTTCT CCAGCGTCAC
TGCACCGAAA AGTTGGGTGT CACCTATCTC AGCGCTCATG TCACTGCCAT CAATGAACAC
TCTAACGGTG ACATCGCCTC ATTAACCACG CAAACAACGG ACAAACTTGA AAAAGAGATA
GAGGGCGATC TGTTTGTCGA TTGCTCAGGC TTCAAATCCC TACTCTTAGG TCAGCACTAC
CAAATACCCT TTATCGATTG TAGCAACGTG CTCTTTATCG ACACAGCCTT AGCGGTGCAC
GTGCCCTATG ACGAAGAGAA TAGCCCCATC GCCTCCCATA CCATCTCCAC TGCACAAGAG
GCGGGTTGGA TCTGGGATAT CGGCTTGCAG CATCGACGAG GCGTCGGTCA TGTCTACTCC
AGTAGATACA CAGATGAGGC TACAGCCATG CAGGCATTGG CCGATTATAT CGGTCCCAAA
TTTGACTCAC TCACAGTGCG AAAAATCCCC ATTAAGAGTG GCCACCGTAA GACTTTCTGG
CACAAAAACT GTGTCGCCGT GGGTCTATCA GCAGGTTTTC TTGAACCGCT AGAAGCCTCG
GCGATTGTCC TTGTTGAACT TTCAGCACAG ATGATTAGCG AACAGCTACC CGCCAACCGT
GAGGTGATGG ATATCGTCGC AAAACGTTTT AATCAAACCT TCAACTACCG ATGGGAGCGC
ATCATCGACT TTCTCAAGCT GCACTACATT CTAAGTCGAC GCTGTGACAG CGACTTTTGG
AAAGATAACC GCGACCCTAA AACGATCCCT GATAGCCTAC AAGATCTGAT GAAAGTATGG
CAGCACAGAG CACCGGCGGA CATGGACTTC ACCAGTAATA ATGAAGTTTT CCCGGCTGCA
AGCTACCAAT ATGTACTCTA TGGAATGGGT TTTGATACCG ATTATTCAGT CACGCCTCAT
CTACTCAATG ACTGGCAATA TGCTCATCGA CAGTTCGCTA AAAATCAGTA TTTGATTGAG
CGGGCTACCG TACAATTACC GAGCAATAGA GAGCTTATCA ATAAGATAAA ACAATATGGC
TTTAGCCAAA TTTAA
|
|---|
| Protein sequence | MDKPTQKIVI VGGGTAGWIT AGWLAAHHKV TSGSPVEVIL VESPDTPSIG VGEGTWPTMR
NSLIKMGISE TDFIRECDAT FKQGAKFAKW VDGSDDDFYY HPLVLPQGFT QHDLAPYWAS
LHAESNEESK HSFSNAVCFQ ESVCEQGLAP KTIRTAEYSD VANYAYHLDA GKFSQFLQRH
CTEKLGVTYL SAHVTAINEH SNGDIASLTT QTTDKLEKEI EGDLFVDCSG FKSLLLGQHY
QIPFIDCSNV LFIDTALAVH VPYDEENSPI ASHTISTAQE AGWIWDIGLQ HRRGVGHVYS
SRYTDEATAM QALADYIGPK FDSLTVRKIP IKSGHRKTFW HKNCVAVGLS AGFLEPLEAS
AIVLVELSAQ MISEQLPANR EVMDIVAKRF NQTFNYRWER IIDFLKLHYI LSRRCDSDFW
KDNRDPKTIP DSLQDLMKVW QHRAPADMDF TSNNEVFPAA SYQYVLYGMG FDTDYSVTPH
LLNDWQYAHR QFAKNQYLIE RATVQLPSNR ELINKIKQYG FSQI
|
|---|
| |