| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3775 |
|---|
| Symbol | |
|---|
| ID | 6118124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4600853 |
|---|
| End bp | 4601287 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641635338 |
|---|
| Product | transposase IS200-family protein |
|---|
| Protein accession | YP_001762129 |
|---|
| Protein GI | 170728103 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.806166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00122355 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGAT ATGAGAAAGC ATCGCATGTG TATTGGCGAT GTCAATATCA CATAGTTTGG
ACACCTAAGT ATAGGTTTAG GATTTTAAAG AATAAGTTAG GAAAAGATGT TTACCGATGT
ATTCATGTCT ATAGTGAGCA GTTAGGGTGT GTGGTTGTAG AGTTGAATGT ACAAATAGAC
CATGTACATC TGGTTATCAA AGTTCCTCCG AAGCTATCGA TTTCAAAGTT GATGGGTGCT
TTAAAAGGTA AAATTGCTTT GAAAATGTTT AGCAAGTATC CGTATCTTCG GAAAAATAAG
CTATGGGGAA ATCACTTTTG GCAAAGAGGT TACTTTGTTG ACACAGTGGG GATTAATGAG
GAAGTGATTC GAAGATATGT AAGGCATCAA GAAAAGGTTG AAAAACAGGA GCAGCCGCAA
TTAGATTTGA AGTAG
|
|---|
| Protein sequence | MSRYEKASHV YWRCQYHIVW TPKYRFRILK NKLGKDVYRC IHVYSEQLGC VVVELNVQID
HVHLVIKVPP KLSISKLMGA LKGKIALKMF SKYPYLRKNK LWGNHFWQRG YFVDTVGINE
EVIRRYVRHQ EKVEKQEQPQ LDLK
|
|---|
| |