| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3750 |
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| Symbol | |
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| ID | 6118099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4564144 |
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| End bp | 4565211 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635313 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001762104 |
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| Protein GI | 170728078 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.871351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC ACCTATCTAC GACACTCATT ATCTCAACGC TACTTTTAGC ATCTAGCAGC
TCAATCGCTG ATGAAAAGAA AACCTATCGC TGGCGATTAG CTGAAACCTG GCCAAAGGAT
TTTCCAGTAT TTGGCGACAC AGTGAAAAGC ATGGCACAGC GGGTTAAAGA GATGTCTAAC
GGCCGCCTAA TTATCTCTAT TGATTCCAAA AATAAACACA AAGCCCCTCT AGGCATCTTC
GATATGGTTC GAGCAGGGCA ATATCAGATG GGCCACTCAG CTTCCTATTA TTGGAAGGGG
AAAGATCTCA AAACCATGTT CTTTACAACC AGACCCTTTG GCATGACCGC AACCGAACAG
TACGCTTGGT TTTACTATGG CGGCGGCATG GAGCTAATGC AGGAGGTCTA CGGGCCCTAT
GGACTCCTCT CCTTCCCGGG TGGCAATACT GGTAATCAAA TGGGTGGCTG GTTTCGTAAA
GAGATCAAGT CGGTAGATGA TCTGCAAGGC CTTAAGATGC GGATCCCAGG TTTTGCCGGA
GAGGTGATAT CTAAACTAGG TGCAAGCCCA GTCAATATCC CAGCAGGCGA GCTATATACT
GCACTTGAGC GAAATACTAT CGATGCTTTG GAGTGGGTAG GACCATCACT GGACTTACGC
ATGGGCTTTC AAAAGGTTGC TCCCTTTTAT TACACAGGCT GGCATGAACC CGCGACTGAG
CTGCAGTTTC TAGTGAATGA GAAAGCCTTT AATACGCTGC CAAACGATTT GCAAGCTATC
TTAACTATCG CCATGCGAGC TTCTGCCTAT GACATGTATG CTCAATCGAT GCATGAAAAC
GCCATCAACC TTGAAAAAAT AGCGAAAGAG CACCCAGAGA TCCAGATAAA GACCTTCCCA
GCAAGCATCA TGCTCAAGCT GCAACAAGCC AATAACGATT TAATAGAGCA GTTCAAACAG
CAAGACCCAC TTACAAAAGC GATCATCGAG TCACAGGAAC GTTATCAAGA GATAACACGT
CCATGGACAC AAATATCTGA TCAAACCTAT CTGGAAATTA GCCAGTAA
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| Protein sequence | MFKHLSTTLI ISTLLLASSS SIADEKKTYR WRLAETWPKD FPVFGDTVKS MAQRVKEMSN
GRLIISIDSK NKHKAPLGIF DMVRAGQYQM GHSASYYWKG KDLKTMFFTT RPFGMTATEQ
YAWFYYGGGM ELMQEVYGPY GLLSFPGGNT GNQMGGWFRK EIKSVDDLQG LKMRIPGFAG
EVISKLGASP VNIPAGELYT ALERNTIDAL EWVGPSLDLR MGFQKVAPFY YTGWHEPATE
LQFLVNEKAF NTLPNDLQAI LTIAMRASAY DMYAQSMHEN AINLEKIAKE HPEIQIKTFP
ASIMLKLQQA NNDLIEQFKQ QDPLTKAIIE SQERYQEITR PWTQISDQTY LEISQ
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