Gene Swoo_3703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3703 
Symbol 
ID6118047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4510314 
End bp4510808 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content44% 
IMG OID641635262 
Productrare lipoprotein B 
Protein accessionYP_001762058 
Protein GI170728032 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00988017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000022488 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTATTA AACGCATATG TTTCGCCATC ATGACACTGG CTATTTTGTT CAGTGCTGGT 
TGCGGCTTTA AACTTCAGGG AAGCTACTCC ATCCCAGAAC AGTTAAGAAC TCTACACTTG
AGCAGTCAAG ATCAATACAG TGAGCTGACT CGTTTGGTGC GTGAGCGATT ACGCCTACAC
AGCATTACAC TCGCTGAGGA TAGTGATAAC GTTCCTACGC TACAGATATT GCATGACTCA
CTCGATAGAT CGACTCTCTC ACTATACCCA ACGGGCAATG TGGCTGAGTA TGAACTGACC
TATCATGTCA CCTTTGCAGT TGCATTCCCC GATAAAGAGT CTCAGCGATT CGATGTTGAT
ATTCATCGTG ATTATCTTGA TGATCCCCGT ACTGCTTTAG CAAAAAGCCG TGAGATGGAG
ATGCTACTCA AAGAGATGCG TATACAAGCC GCAGATCAGA TGATTCAAAC ACTTGCTTCC
ATTGAGGTTA AGTAA
 
Protein sequence
MLIKRICFAI MTLAILFSAG CGFKLQGSYS IPEQLRTLHL SSQDQYSELT RLVRERLRLH 
SITLAEDSDN VPTLQILHDS LDRSTLSLYP TGNVAEYELT YHVTFAVAFP DKESQRFDVD
IHRDYLDDPR TALAKSREME MLLKEMRIQA ADQMIQTLAS IEVK