Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3703 |
Symbol | |
ID | 6118047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4510314 |
End bp | 4510808 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641635262 |
Product | rare lipoprotein B |
Protein accession | YP_001762058 |
Protein GI | 170728032 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00988017 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000022488 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTATTA AACGCATATG TTTCGCCATC ATGACACTGG CTATTTTGTT CAGTGCTGGT TGCGGCTTTA AACTTCAGGG AAGCTACTCC ATCCCAGAAC AGTTAAGAAC TCTACACTTG AGCAGTCAAG ATCAATACAG TGAGCTGACT CGTTTGGTGC GTGAGCGATT ACGCCTACAC AGCATTACAC TCGCTGAGGA TAGTGATAAC GTTCCTACGC TACAGATATT GCATGACTCA CTCGATAGAT CGACTCTCTC ACTATACCCA ACGGGCAATG TGGCTGAGTA TGAACTGACC TATCATGTCA CCTTTGCAGT TGCATTCCCC GATAAAGAGT CTCAGCGATT CGATGTTGAT ATTCATCGTG ATTATCTTGA TGATCCCCGT ACTGCTTTAG CAAAAAGCCG TGAGATGGAG ATGCTACTCA AAGAGATGCG TATACAAGCC GCAGATCAGA TGATTCAAAC ACTTGCTTCC ATTGAGGTTA AGTAA
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Protein sequence | MLIKRICFAI MTLAILFSAG CGFKLQGSYS IPEQLRTLHL SSQDQYSELT RLVRERLRLH SITLAEDSDN VPTLQILHDS LDRSTLSLYP TGNVAEYELT YHVTFAVAFP DKESQRFDVD IHRDYLDDPR TALAKSREME MLLKEMRIQA ADQMIQTLAS IEVK
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