| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3666 |
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| Symbol | |
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| ID | 6118000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4469530 |
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| End bp | 4470297 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635217 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001762023 |
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| Protein GI | 170727997 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00136979 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCT CACAGCTAGA TTATCGCCTT GGAGGGCGCG GGGTATTTAT TACCGGCGGT
GCCAGCGGTA TAGGAGCTGC ATTAGTTAGG GCATTTGTGG AGCAGGGGGC GAATGTCACC
TTTGTGGATA CAAATCGTGA TGCCGGGGAA GCGTTACTAC AAGGTTTGGA TATTAATCGA
GGTCAACAGG TTGCTTTTCA TCTGTTGGAT GTCACTGACA CTAAGCAGTT GCAACAGATG
ATCACCGAGC AAGATCAAAA GCTTGGTCAG TTGGATATAT TAATTAATAA CGTAGGTAAT
GATAGTCGAC ATGATGCAGA TGGAGTTGAT GAACATGAAT GGAAACAGTG CATGGCTATC
AATCTGGATT CTGCTTTTTT TGCCTCACAG GCCGCCTATC TGGTCATGAA GCAACGCAAA
CAGGGGGTCA TTATCAACTT TAGCTCCAAT ATGGCTTATA TCGGGGAGCG CAATATGGCG
GGTTATATCA CTGCGAAAGC GGGGATTGCT GGCATGACTA AGGCGCTGGC AAAAGATTAT
GGTGAGAGTC GAGTAAGAGT CAATGCCATT GTACCCGGTT GGGTGGCCAC ACAGAGGCAA
CTAGAGCAGT GGTTATCACC AGAGCAAGAG CAACAGCTGA TGGAAAAGGT GGCGATACAG
AAACGGATCA CTCCTGAAGA TATCGCCAAG CTAGCACTGT TTTTAACCTC TGAAGATAGC
GAACTGATAA CGGGCCAATG CATGGTTATT GATGGCGGTA GAGTATAA
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| Protein sequence | MTISQLDYRL GGRGVFITGG ASGIGAALVR AFVEQGANVT FVDTNRDAGE ALLQGLDINR
GQQVAFHLLD VTDTKQLQQM ITEQDQKLGQ LDILINNVGN DSRHDADGVD EHEWKQCMAI
NLDSAFFASQ AAYLVMKQRK QGVIINFSSN MAYIGERNMA GYITAKAGIA GMTKALAKDY
GESRVRVNAI VPGWVATQRQ LEQWLSPEQE QQLMEKVAIQ KRITPEDIAK LALFLTSEDS
ELITGQCMVI DGGRV
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