Gene Swoo_3628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3628 
Symbol 
ID6117962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4423041 
End bp4424168 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content43% 
IMG OID641635181 
Producthypothetical protein 
Protein accessionYP_001761987 
Protein GI170727961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATA GATGGTTAAA CCCACGAGCC CTTGTGAGCT TGTCGATACT GCTTTGCTTG 
ATTGTTATGT TAGTCACCTC TGTGCTGATG TTTGCTAAAA ACCACTATAT GCCTGTGGCG
ATGCTACACA CAGTGCTTGG TTTTAGCTTG CTGCTATTTG CAATCTTACA CCTTAAAAAT
AACTTCTCTC CCTTAAAGAG CTATCTGTCG TTGAAGTTTT GGGGCAAAAA GTCGAGATAT
AAGGCCAGTT TCCCCTTAGT GCTGTTTTTA GGAGCGAGTT TGATCGGTCT TAGCTGGTAC
GGCTATGGAC CCATAAAACG TTTTTATCAA TGGGGCATGG AGTTGAGAGT TGCCGATACT
TTTGGTGAAG CGCCGAGTTA CCAATACATT GTGGTAGACA AAACTGATAA ATCTTTATCT
GGGCAAGAGC TGACTATAGA GCTAAGAACT GGGGATAGTT TTTTATGGCC TCAGTATGCA
ATCTGGCTAG AAACCATGGA GGGGGAGTTG GTTCAACCTC TGTATGTGAC TAGTAAACTG
GCAAAGAACA ATTTTGAAAA TAGGGTCACT AAGCTTGATG AGTCCACTGT TTTTAAAGAT
AACCCTTTTA GTACAGCAGA TTTCAAGATG GAAGATGCCT TTAATTTAGT GGTAGAGCCT
GAATCTAAAT CTGAGCGAGT AAGGCCGGAA TCTTTACCTG TTTTTCTACA TCAATTAGGG
ATACGGGATG AGGAGGGGCA GTTTGTTACT CATGGTGAAA ACCTGATACC TGACGCCTAC
ACGGGCGCGA CCATGAGTGA TAACTTTGTC TATCGAACCA AACTTGAAAG CGAACTCAGT
GGGAGGTATA GATTGAAGCT GGAGATGAAT CAGTCCTTTG ATTTTAACCA GTACTACTCT
AGCGACCGTT TCCCTTCAGA TCCTATCTAT TCTGGCAGCG GTTTCTCTGC GCAGCCCTCC
GTGGTTTATG AAACAACTCT TAATTTTGAT AACCCTGAAA GGCTTTATCT GATGGGGTTA
GCTGGCAGAG GTCATCACTC GGGCCAAGAT GGAGATATCC ATAGTGATCT TTCTGGAATG
GACTCAGCAC TTTCTATAGT CGACAGAGTC ATTGTAGAGG TTCATTAG
 
Protein sequence
MLNRWLNPRA LVSLSILLCL IVMLVTSVLM FAKNHYMPVA MLHTVLGFSL LLFAILHLKN 
NFSPLKSYLS LKFWGKKSRY KASFPLVLFL GASLIGLSWY GYGPIKRFYQ WGMELRVADT
FGEAPSYQYI VVDKTDKSLS GQELTIELRT GDSFLWPQYA IWLETMEGEL VQPLYVTSKL
AKNNFENRVT KLDESTVFKD NPFSTADFKM EDAFNLVVEP ESKSERVRPE SLPVFLHQLG
IRDEEGQFVT HGENLIPDAY TGATMSDNFV YRTKLESELS GRYRLKLEMN QSFDFNQYYS
SDRFPSDPIY SGSGFSAQPS VVYETTLNFD NPERLYLMGL AGRGHHSGQD GDIHSDLSGM
DSALSIVDRV IVEVH