| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3614 |
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| Symbol | |
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| ID | 6117948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4408989 |
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| End bp | 4409621 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635167 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_001761973 |
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| Protein GI | 170727947 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0318018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAACG CTAAAGAACT TAAGCAGGTT TTATCGGGTC CTATTGTAAG CAATAACCCG
ATCGCCTTGC AGGTATTAGG TGTATGTAGT GCACTGGCTG TGACCAGTAA GATGGAAACC
GCATTGGTGA TGACTATCGC ACTGACTGCC GTTTGTGCTT GCTCAAACCT GTTCATCTCT
ATGCTACGTA ACCATATTCC AAGCAGTGTA CGTATTATCG TGCAGATGAC GATTATCGCA
TCGCTTGTTA TCGTGGTTGA TCAGGTACTG CAAGCTTATG CTTATGATGT TGCTAAGCAG
CTTTCAGTAT TCGTTGGTTT GATTATTACT AACTGTATTG TAATGGGTCG AGCTGAAGCG
TATGCGATGA AAACGCCGCC AATGATGAGT TTTATGGATG GTATCGGTAA CGGCCTAGGC
TACGGTGCTA TTCTTCTGTC AGTTGGTTTT GTCCGTGAAC TTTTTGGTAA TGGTTCGTTA
TTTGGTGTTG AGATCTTAAG CAAGATTTCA GACGGTGGTT GGTATCAGCC AAATGGTCTG
TTGTTGCTTC CTCCAAGTGC GTTCTTCTTA ATTGGTACTC TGATCTGGAT CATTCGTACT
GTTAAGCCAG AGCAAGTAGA AGCAAAAGGG TAA
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| Protein sequence | MANAKELKQV LSGPIVSNNP IALQVLGVCS ALAVTSKMET ALVMTIALTA VCACSNLFIS
MLRNHIPSSV RIIVQMTIIA SLVIVVDQVL QAYAYDVAKQ LSVFVGLIIT NCIVMGRAEA
YAMKTPPMMS FMDGIGNGLG YGAILLSVGF VRELFGNGSL FGVEILSKIS DGGWYQPNGL
LLLPPSAFFL IGTLIWIIRT VKPEQVEAKG
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