| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3613 |
|---|
| Symbol | |
|---|
| ID | 6117947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4408375 |
|---|
| End bp | 4408983 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641635166 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit E |
|---|
| Protein accession | YP_001761972 |
|---|
| Protein GI | 170727946 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
|---|
| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0602462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATT ATATTAGTTT GCTAATTCGC TCTATTTTCA TCGAGAACAT GGCACTTTCT
TTCTTCCTAG GTATGTGTAC ATTCCTAGCG GTTTCAAAGA AAGTGACCAC GGCGATGGGA
CTGGGTATTG CAGTTGTTGT TGTATTGACT ATCTCTGTGC CAGTTAACCA GATCATCTAT
CAGGGACTTC TTGCTCCTGG TGCGTTGGCT TGGGCTGGTG CGCCAGAAGC TGACTTGAGC
TTTTTGAAGT TCATTACCTT TATTGGTGTG ATTGCCGCTC TGGTACAGAT CCTTGAGATG
GTATTGGATA AGTTCTTTCC ACCACTGTAC AACGCTCTGG GGATCTTCCT TCCACTAATT
ACCGTTAACT GTGCCATCTT TGGTGCGGTA TCTTTCATGG TTGAGCGTGA TTATAACCTA
GCTGAGAGTA TGGTATTTGG TGTCGGTTCA GGACTTGGCT TTGCGTTAGC TATTGTCTTG
TTAGCTGGTA TCCGTGAAAA GCTGAAATAT GCTGATGTGC CTGATGGACT ACGTGGCTTA
GGTATTACCT TTGTGACTGC TGGTTTGATG GCGCTTGGAT TCATGTCGTT TTCTGGTGTG
TCCCTATAA
|
|---|
| Protein sequence | MEHYISLLIR SIFIENMALS FFLGMCTFLA VSKKVTTAMG LGIAVVVVLT ISVPVNQIIY
QGLLAPGALA WAGAPEADLS FLKFITFIGV IAALVQILEM VLDKFFPPLY NALGIFLPLI
TVNCAIFGAV SFMVERDYNL AESMVFGVGS GLGFALAIVL LAGIREKLKY ADVPDGLRGL
GITFVTAGLM ALGFMSFSGV SL
|
|---|
| |