Gene Swoo_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3584 
Symbol 
ID6117918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4377578 
End bp4378498 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content46% 
IMG OID641635137 
Producthypothetical protein 
Protein accessionYP_001761943 
Protein GI170727917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0998298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCAAT CTAATCAGGC TTACGTTTAT GGCGTAGGTG CAATCTGTTT GTGGTCAACC 
GTTGCCACCG CCTTTAAACT GGCACTGGCA CATTTCAGCC CTCTGCAATT AGTGCTAGTG
GCTGTCACCA CATCAATTAT CGCCCTTGGA CTCATTTTAG TCGTTCAAGG AAAGCTCAGC
CTGATTAAGG CCCAATTTAA AGCTAGACCC TTTTTCTATC TTCAGACAGG ATTAATTAAT
CCATTTCTCT ACTATCTGGT GCTTTTTAAG GCTTATGATC TTCTCCCCGC CCAGCAAGCA
CTGTCTCTCA ATTACACTTG GGCCATCCTT TTACCTCTTC TTTCTGTGCC TATGCTGGCA
CAAAGGCTTC GTAAAAGTGA TATGGTCGCC GCCATCATCG CCTACTTTGG TGTATTCGTT
ATTGCCACCA ACGGTAACCT TACAAGCTTT ACGTTTGAGA GTGGCACTGG AGTAATGTTA
GCGCTAACTA GTACCCTGCT CTGGTCTCTT TACTGGATAA TCAACACCAA AGACAAGGGC
GATCCTGTTG TCAGCCTGCT ATTAAGTTTC CTTGTAGGTT TCCCCTTCAT TCTTGGCACG
CTGCTGCTGA CGCAAGAGTT ACCAAGCTGG GATCTAAAAG CAGTTGCAGC TGGCATTTAT
GTGGGACTGT TCGAAATGGG GGTCACTTTC GTACTCTGGT TAGTGGCGCT GAAAAAAGCC
GATCGCACTG CCAGTATTAG CACCATGGCC TTTATGTCTC CTGTCATGAG TATCGGCTTT
ATCGCCTGGA TTTTGCAGGA GGAGATAGCC CACTCCACCT ACATAGGATT AGGCCTTATC
CTATCGGCCT TAGCGCTACA ACAACTATTG CCACTGCTCA ACAAACTTAA GATAAAAAGT
GGTACCAGCC ACTCTCATTA A
 
Protein sequence
MKQSNQAYVY GVGAICLWST VATAFKLALA HFSPLQLVLV AVTTSIIALG LILVVQGKLS 
LIKAQFKARP FFYLQTGLIN PFLYYLVLFK AYDLLPAQQA LSLNYTWAIL LPLLSVPMLA
QRLRKSDMVA AIIAYFGVFV IATNGNLTSF TFESGTGVML ALTSTLLWSL YWIINTKDKG
DPVVSLLLSF LVGFPFILGT LLLTQELPSW DLKAVAAGIY VGLFEMGVTF VLWLVALKKA
DRTASISTMA FMSPVMSIGF IAWILQEEIA HSTYIGLGLI LSALALQQLL PLLNKLKIKS
GTSHSH