| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3541 |
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| Symbol | |
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| ID | 6117873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4321776 |
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| End bp | 4324193 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635092 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_001761900 |
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| Protein GI | 170727874 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0300151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAG ACGAACACAG TGCATTAATA GAACAGCTAA AGCCCCTCTT AATGGAACCC
GATTTCCAGG CTATTTTCGA TATGCTGACA AAAGATGAGT CCAACTCCAC CCGCTTTCTT
TTGAAGATGG AGCTTAATCG CATCTCAGCG CTCTGCACAC GTATCATAGA TCTTAGGGAT
AAGTCTGAAC TAGCCTGTGA AGAGTTCGAA GATGGAGGTC GCCAACATTA CTTAGATGAG
CCAGCAAAAG AGAGCTTTAA AGAGTCCATG GCGCTCTACC ATGGCAAGTA TACGCTAGGT
GTATATGAGC ATGTCATTGA TGCCCATAGG CGCCGCAAAA CAAAACTACA GGAGACTGGC
AATGTAGTTG AAGTCTCGGC TCCTGAACCC TATATTGCAA CGGGCGTAGT TTTAGGCAGC
TACTTCAACC GCAGTGAAGA GAGAATGAAT TACAGCATTC GGATCTCCGC AGCTCAACCT
GGCCGAAATG AGAGCTTAGG GATCACTGTC GATCTGTCTG TAGGCGGAGC TCGTATACGT
CTACCATTAA AACATAGTTT TAATGTCGAT AACCCAATAA GAGTTAAACT GCTTGAGCTT
AGCGATGAGT ACTATCACGA AGATCTACAG CAAGGCGTTG AATATCAAAT TGTCGATACA
GAAACCAATT CAGAGTATTG CTGGATGCGC CTTAAACGGG TCGGTGGCAG TGACACACTC
ACACAGATGC TCTCCAATCT GATTAAGGGA TATAAGTTCA GATATAAAGT CGATATTAAC
GATATCTTAG TCGCAGCAAC TGGACTTGGC TTTGAGCGTC ACTATCTGCC TCACCTTCCT
CATTTACCGA TCTTTATTGA GCCCGATGCT GATAACTATA AAATAACCCA TAAGCTCTTA
AGCCGAGATA ACCAGCAACT GCAATATTAT TTTCAGGATG AGCAAGATAT CAGTCAGCTG
CCGAACATGA TCACTGGCAG CAGAATCAAG GCCATGATAG ATGAACCCGA TAACAAAGAT
CATACTCTGT TTTTCTGTTT CACTTTCCAC AGTAATGGCC GAGTTTACTT CTATTCAGCC
ACGCTAGCAG AATTGAAAGA AACCAAGCTT CTCTCACTGT TTTTAAGTTT TGGCTCCAGT
AAACCATCAT GGAAAACATT GAAGTTAACC TATCATGCAA TCGACCATAG AAAATCATAC
AAAGCCAGCA TATTGCCTGG TGATGATAGC TGCTACTCAG CGCTTACTGA GGCGCAACTC
AAACGTTTCT CCCATGTGCT ACAGCTCATC GATCTCACCG ATCCACAAGC GAAAGAACAC
TACCTTAACT GGAATGGCAG ATCTGATAAG GCCACCAACG AGCTCAAGGT GTTCGGCCAA
CAGAAGCTAT TGAAAAACAA CGTTAAGTTA CTTTCGCTCC AATTCAGTGA ACGACGTAAT
GAAGCTAGGT TTTCATTTAA AACTCAAGTA AAAGCCAGCC AAGGTAAAAA GGTCGTCACG
GGTACCACTC GAGACATCTC CAGTAAAGGC TTACAGCTTG CATTAGAGCA ACCTATTCAT
TTCGACAGAA CAGCTCCAAT ACAACTGACC TTTCCAAAGC TGCAATCTAT CGCTGGTAAA
ACAAATCTAA GCCAGCTTCC CTATCGATTA ATCAGGGAGC GACAATCAGG TTCGAATATC
CATTTGGCTG CAGTCATGGG TCATTCACCT CATATTGGTG TCGAGTTTAT GAATAAACTC
ATCACCAATA ACCGTGACAA ACTTGAAAAG TTAACTGAAG CCAACAGTGA GATGAAAGAG
TTGGCTGACG CCTTAAAGAA TTTACTGGTA CGTAACTTAG ACTCAGTTCC CTTCTTTATC
GAAAAAACCG TTAAAACGGC TAAATTAAGC ACCTTAGGGG TCAGTGCCCA TAAAAATGAG
ATCACAGATC TATTTGCGGC ATCGGCCTCT CGCCCTCTAG AGTATAATCT CGCCTCTTTA
CTTAAAGACG GGCGATTAAA GCAAGATTTC ATCGACCCGA TAAGAGCGAT GAAGCACCAA
ACAGGTCTCG ATTACTTCGA ACTCTACCTA CAGATATCCA GGCAGTCCCT TGGGGAGGTA
AAAGTAAAAT GCGTTGCCCC CAACGAGATT GGTGATACTA AGGCCAGAGA ACACTTTATC
ACTCAAAGTC AAAATCTAGG TCGATTTATG GCCTTAAGGG TGTATCGAGG TGTCACTGAT
AAACCGGATC TTAGCTATGT CCGCAAGGAG ATGGAGTACA TAACCATACA TGCCCATCAC
AAGGCAAAAC AGCTACAAGA ACGTTTATGG CGAATTGTCG GCGTAGGCGA GCTTCTCGAC
ATCACCGAAG AGGTGCTGCT TAGGTATCCT GATCTCTATC AGCAAACAAA ACTTGAACCA
GAGAATAGCT TAGCTTAA
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| Protein sequence | MSLDEHSALI EQLKPLLMEP DFQAIFDMLT KDESNSTRFL LKMELNRISA LCTRIIDLRD
KSELACEEFE DGGRQHYLDE PAKESFKESM ALYHGKYTLG VYEHVIDAHR RRKTKLQETG
NVVEVSAPEP YIATGVVLGS YFNRSEERMN YSIRISAAQP GRNESLGITV DLSVGGARIR
LPLKHSFNVD NPIRVKLLEL SDEYYHEDLQ QGVEYQIVDT ETNSEYCWMR LKRVGGSDTL
TQMLSNLIKG YKFRYKVDIN DILVAATGLG FERHYLPHLP HLPIFIEPDA DNYKITHKLL
SRDNQQLQYY FQDEQDISQL PNMITGSRIK AMIDEPDNKD HTLFFCFTFH SNGRVYFYSA
TLAELKETKL LSLFLSFGSS KPSWKTLKLT YHAIDHRKSY KASILPGDDS CYSALTEAQL
KRFSHVLQLI DLTDPQAKEH YLNWNGRSDK ATNELKVFGQ QKLLKNNVKL LSLQFSERRN
EARFSFKTQV KASQGKKVVT GTTRDISSKG LQLALEQPIH FDRTAPIQLT FPKLQSIAGK
TNLSQLPYRL IRERQSGSNI HLAAVMGHSP HIGVEFMNKL ITNNRDKLEK LTEANSEMKE
LADALKNLLV RNLDSVPFFI EKTVKTAKLS TLGVSAHKNE ITDLFAASAS RPLEYNLASL
LKDGRLKQDF IDPIRAMKHQ TGLDYFELYL QISRQSLGEV KVKCVAPNEI GDTKAREHFI
TQSQNLGRFM ALRVYRGVTD KPDLSYVRKE MEYITIHAHH KAKQLQERLW RIVGVGELLD
ITEEVLLRYP DLYQQTKLEP ENSLA
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