Gene Swoo_3432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3432 
Symbol 
ID6117764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4200660 
End bp4201331 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content44% 
IMG OID641634987 
Producthypothetical protein 
Protein accessionYP_001761795 
Protein GI170727769 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGTC CCAACACTTT CTCTTTTTTA TCCCTACTCA CCAAAAACAA TCAACGAGAC 
TGGTTCAAAT CCAACCAAAC TCAATATGAA TCAGAAGTTC GAACACCTGC ACTACAATTT
ATCGAGGCGA TGCAGCCACA CGTTCTTACC CTCTCCCCTA GATTAGTCGC CCTGCCTAAA
AAAATAGGCG GCAGCTTAAT GCGCCCCCAA AGAGATGCTA GGTTCAGTAA GGATAAGACC
CCCTATAAAA CCAATGTCGG CATTCAATTC AGGCATTTTC AGGGTAAAGA TGTCCATGCA
CCGGGACTCT ATATCCATAT TGCAAACGAG GGGTGTTTTC TGGGTGCAGG AATTTGGCAT
CCAGATTCAA AGGCGCTCAA TAAGCTTAGA ACCTGTATCG ATGAGAACCC CAACGCCTAC
AAGAAAGCAC TCGCCCAATT ACGAGCAGCC GGTTTTGAAA TGGAGGGAGA CAGCTTAATA
AGGCCCCCCA AAGGCTATGA CAAGACTCAC CCTATGTTGG ATGAATTGAA ACGCAAAGAC
TTTATCGCTA TCAAACCCAT TAATGCCAAG CAGATCTATG ATAAAAACTT CGTGAGCTTA
TGCGTTAAAG AGTTTGAGCA AACTCAGAAA CTAATGGGTT ATTTATGCTT TGCACTGGAT
CTGGATTACT AA
 
Protein sequence
MFSPNTFSFL SLLTKNNQRD WFKSNQTQYE SEVRTPALQF IEAMQPHVLT LSPRLVALPK 
KIGGSLMRPQ RDARFSKDKT PYKTNVGIQF RHFQGKDVHA PGLYIHIANE GCFLGAGIWH
PDSKALNKLR TCIDENPNAY KKALAQLRAA GFEMEGDSLI RPPKGYDKTH PMLDELKRKD
FIAIKPINAK QIYDKNFVSL CVKEFEQTQK LMGYLCFALD LDY