Gene Swoo_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3393 
Symbol 
ID6117725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4150962 
End bp4151540 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID641634948 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_001761756 
Protein GI170727730 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCTA TAACCCAAGA GGAGATGACT TTTCTATCTC ATTTTCTAGC TCAATTAGGG 
TTAGACTGTA AGACCATAGA GGCAAGCTAC TCACACATTA AACCTCTCTC TTTGAGTGGC
GCTGATGTTT TACTGGAGCA AAATAGTCAG CAGGAGTACG GCTACTTTAT TCTGTCTGGA
ATATTACGGG CGTGTCATTA TGGCGAGCAG GGCAGTGAAC GTTGTAAGGA GTTTTATTTT
CCCGGTGAGC TCTGTTTTCT CTACACAAGT TGGTTAACAC GAGCACCCTC TCAATATCAG
ATTGAAGCGT TAGGTAAGGC GCGAGTGGTG CAAATTCCCC TAAGTTTACT GTCACTGCCA
CAATGGATCC CAGCTCAGCT CAATTTGTTG AAACAACAGT TACTGTTTAA AGAGCAAAAA
GAGGCGTTTT TACTACTGAA AACACCTGAG CAGAGGTACC TTCATCTGCT GGAAGCTTGG
CCTTTATGGG TTGAAAAACT CAATAACATT CAACTTGCCA GCTATATTGG TATTAGCCCT
GTGAGTCTTT CAAGATTGAA AGCGAGACTC TCACTTTAG
 
Protein sequence
MVSITQEEMT FLSHFLAQLG LDCKTIEASY SHIKPLSLSG ADVLLEQNSQ QEYGYFILSG 
ILRACHYGEQ GSERCKEFYF PGELCFLYTS WLTRAPSQYQ IEALGKARVV QIPLSLLSLP
QWIPAQLNLL KQQLLFKEQK EAFLLLKTPE QRYLHLLEAW PLWVEKLNNI QLASYIGISP
VSLSRLKARL SL