| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3366 |
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| Symbol | |
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| ID | 6117698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4124456 |
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| End bp | 4125541 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634922 |
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| Product | spermidine/putrescine-binding periplasmic protein-like protein |
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| Protein accession | YP_001761730 |
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| Protein GI | 170727704 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.424876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.320471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTATA TTATTCTGTT AGCTAGCACT TTAGCTATGG TCTCTCCAAT CTCACATGCA
ACAGAGATCC TACGAATATT TACCTGGGAC GGTTACGTCA CCCCCCAAGA TCTCACCGCA
ATTAATCAGC AACTCAAAGT TCACGACTAC AATATTGAAG CTCAAGTCAT TAGCCCGCTT
GCGTCTGGCC CTGAGCAGAT GTTTGATGTT ATCCGCTCCG GCAAATGTGA TATCTCATTT
CTGACCCTTA ATTACATCAA GATGCAGGAG GAGAAAACCG CCAAGCTTCT TCAGGTTATC
AACACTCAGT CTCCCAGAAT GCCTAACTAC AAGAAGCTAA AAGCTGAGCT AACAGCACTT
CCTATGGGAG TTGTTAAGCA GGGAAGTGTC TATATCCCCT TTGGAGGTGG AGCCTATGGC
ATATGGGCTA ACATGAATAA GTTAACGATT GATGAGTTGC CAGTATCCGT AAAAGATCTC
TGGGATGATA AGTGGACAGG TAAACTCTCT CTGGCCAAAG GGCAGATCCA GCCAAATATT
GCTCTAGTCA TGCTCTCTAT GGACAAGCCC CCTTTCTATA TTAACGACCT CATCAACTCA
GGTCATAGAC GACAAGCGAT GCAGTTTGTT GCAGATGAAG CACAGCTCCA GACTAACCTT
TTATATCAAC AGGTCCACTC CTTTTGGGAT GGGACTCCTA GCTATGATCA GGAGCTACTA
TTAACCTCAA GCTATGGTGT TGAGATTGAG AATAAAAATG CTGAGGGTGG TCAATGGCAA
TATGTTCAGT TTGAAGAGGG TAGTACTGTT TGGCTCGATA CCATCAACTT TGCTAAACAC
TTAAGTGGAG CAAAACTCGA AGCAGCCGAA ATCGTCGCTA ACTACTTTAT CGGAAAATCC
GTTCAGAATC GGCTCGTCAA TGAGTTAGGC ATGGTATCGG TTAGCAATCT TGTCGAAAAC
AATCCATTAC TCGATAACAA TCCAGACTTT TTTTCCAAAC AGATGTTCTG GCAACCTTAT
GACAAAACCG CCGACAACAT CATGGACCTC ATGTCAGATG CTGCGATGAC ACAAGCTATT
CCATAG
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| Protein sequence | MRYIILLAST LAMVSPISHA TEILRIFTWD GYVTPQDLTA INQQLKVHDY NIEAQVISPL
ASGPEQMFDV IRSGKCDISF LTLNYIKMQE EKTAKLLQVI NTQSPRMPNY KKLKAELTAL
PMGVVKQGSV YIPFGGGAYG IWANMNKLTI DELPVSVKDL WDDKWTGKLS LAKGQIQPNI
ALVMLSMDKP PFYINDLINS GHRRQAMQFV ADEAQLQTNL LYQQVHSFWD GTPSYDQELL
LTSSYGVEIE NKNAEGGQWQ YVQFEEGSTV WLDTINFAKH LSGAKLEAAE IVANYFIGKS
VQNRLVNELG MVSVSNLVEN NPLLDNNPDF FSKQMFWQPY DKTADNIMDL MSDAAMTQAI
P
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