| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3347 |
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| Symbol | ispF |
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| ID | 6117679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4102275 |
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| End bp | 4102754 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634903 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001761711 |
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| Protein GI | 170727685 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000968348 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000222893 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATAC GTATTGGTCA CGGGTTTGAT GTGCATAAAT TTGGTGGCGA TTCACCGCTA
TTGTTAGGTG GTGTAAATGT GCCATATGAA ACAGGATTAA TCGCACATTC AGATGGTGAT
GTTGTACTGC ATGCAATCTC TGATGCCGTA TTAGGTGCGG TAGCCTTAGG TGATATTGGC
AAGCACTTTC CGGATACCGA TGATGATTTC AAGGGCGCTG ACAGTCGTCA TTTACTGCGT
CACTGTTATC AACTGGCAAA AGATAAAGGT TTTGTGATTG GAAATCTAGA CGTAACCATT
ATTGCGCAAG TACCTAAGAT GGCGCCCCAT ATTCAAGCCA TACGCGAAGT GTTAAGTCGT
GATTTTGCGA CCGATTTGGA TAATATTAAT GTTAAAGCGA CAACGACCGA AAAGCTTGGT
TTTACTGGTC GTAAAGAGGG GATCGCTGTG GAAGCTGTGA TCTTACTGGC AAAGGCATAA
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| Protein sequence | MNIRIGHGFD VHKFGGDSPL LLGGVNVPYE TGLIAHSDGD VVLHAISDAV LGAVALGDIG
KHFPDTDDDF KGADSRHLLR HCYQLAKDKG FVIGNLDVTI IAQVPKMAPH IQAIREVLSR
DFATDLDNIN VKATTTEKLG FTGRKEGIAV EAVILLAKA
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