| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3293 |
|---|
| Symbol | |
|---|
| ID | 6117614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4037503 |
|---|
| End bp | 4037850 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641634839 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001761658 |
|---|
| Protein GI | 170727632 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4323] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000025592 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA GTAAGTCATC TCAACCTTCA AAAAATAGAG AGTACGCTAC TTTTAAAGCG
TTTTATCCTT TTTACCTCTC TCAGCACCAA AATACCACAT GCAGAGTGCT TCACTATATA
GGCAGCTTTT TAGTTCTAGT CATCTTAATA GAGACTCTGT TCAGCCAAAA CTGGATTCAA
TTGGCTCTAT TGCCTTTAGT GGGTTACGGC TTTGCTTGGG TTGGCCATTT TGTTTTTGAG
AAGAACAGAC CTGCGACTTT TCAATACCCT CTCTATAGCC TTCTCGGTGA TTGGGTTATG
TTTACACAAG GAATAGCTAA GTTTTTTCAA CGAAAATCTA ATACCTGA
|
|---|
| Protein sequence | MKMSKSSQPS KNREYATFKA FYPFYLSQHQ NTTCRVLHYI GSFLVLVILI ETLFSQNWIQ
LALLPLVGYG FAWVGHFVFE KNRPATFQYP LYSLLGDWVM FTQGIAKFFQ RKSNT
|
|---|
| |