Gene Swoo_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3269 
Symbol 
ID6117588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4011478 
End bp4012245 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content45% 
IMG OID641634813 
ProductUDP-N-acetylglucosamine acyltransferase 
Protein accessionYP_001761634 
Protein GI170727608 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 
TIGRFAM ID[TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000114538 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0243575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGATA AATTAGCGTA TATTCACCCT GATGCCAAAA TTGGTAACAA TGTCACTATC 
GGCCCATGGA CCTATATCGG TGCAGGTGTT GAAATTGGTG ATGACTGTTG GTTAAGTTCT
CACGTTGTCG TGAAAGGGCC AACGGTTATT GGTAAGGGCA ATAAAATATT TCAATTTGCC
TCAGTGGGTG AAGATTGCCA AGACAAAAAG TACGCTGGTG AGCCAACACG TCTAATCATG
GGTGATAACA ATATCATTCG TGAATCTGTG ACGATACATC GTGGCACGAC CCAAGATAAA
GGTGAAACCC GAATAGGCTC AAACAACCTG TTTATGGCTT ATGTTCATAT CGCCCATGAC
TGTGTTGTTG GCAACAATGT GATCATGTCT AACAATGCCT CTATTGCAGG CCATGTACAT
GTCGGCGATT GGGCTATTTT AGGTGGCTTG ACCGGTGTAC ATCAGTTTGT CCATATTGGC
GCCCATGCTT TTACTGCGGG TTATTCGCTT ATTTTGCAAG ATGTTCCTCC GTTTGTGATG
GCATCTGGCC AGCCAGGTAT TCCTCGTGGC TTGAACAGTG AAGGGATGAA GCGTCGCGGT
TTCTCTAAAG AGAGCCAGAT GGCGGTGAGA AGAGCGTATA AGACCCTTTA TCGTAAAGGG
CACACAGTTG AAGAGGCGGT AGCCGCTTTG GCTGAAGAGT CTGATGATGA ACAAGTAAAG
CTGTTAATCG ACTTTGTGAC TAGCTCCAGT CGTGGCATTA TTCGCTAA
 
Protein sequence
MIDKLAYIHP DAKIGNNVTI GPWTYIGAGV EIGDDCWLSS HVVVKGPTVI GKGNKIFQFA 
SVGEDCQDKK YAGEPTRLIM GDNNIIRESV TIHRGTTQDK GETRIGSNNL FMAYVHIAHD
CVVGNNVIMS NNASIAGHVH VGDWAILGGL TGVHQFVHIG AHAFTAGYSL ILQDVPPFVM
ASGQPGIPRG LNSEGMKRRG FSKESQMAVR RAYKTLYRKG HTVEEAVAAL AEESDDEQVK
LLIDFVTSSS RGIIR