| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3260 |
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| Symbol | |
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| ID | 6117579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3997555 |
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| End bp | 3998682 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634804 |
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| Product | patatin |
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| Protein accession | YP_001761625 |
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| Protein GI | 170727599 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAGAGA AAACAGCATT AGTTCTTGGA GGTGGTGGTG CGCGTGCGGC TTATCAAATA
GGTGTGCTCA AGGCCATTGT CCAGTTCTAC CCCAGAAATC ATGGCATCCC CTTTAAGATA
ATTTGCGGCA CCTCTGCTGG TGCAATCAAT GGCACTTCAA TCGCGACTCA TGCCTCCTGC
TTTCATCTCG GTGTTAGAAA ACTGGAATGG GTTTGGCGTA ACTTTCGCAC CGATAAAATC
TACAGTGCAT CCATGTCAGG AGTACTAAAG CATTTAGGCA AGATGCTCTT GATGAGTATG
CAAGATGACA AGGTCAATAC CAATGCTGGG AGTCTATTTA ACAGTGAGCC ATTAAGGGGG
TTGTTAAATG AGCTGATTAA TTTTGCTCGC ATCGATAGAA ATATTGGCAG TGGTGCGCTC
AGCGCTCTAA GTATCGATAC CTCCTGTTAT AACAGCGCCC GCTCTGTCAC CTTCTTTCAA
GGCAACCACG ATATAGCCCA GTGGCATAGA GACAGGCGCA GTGGTCAGCG AACTCAGCTC
AATACTGATC ACTTACTGGC AAGTTCAGCG ATTCCGCTAG TATTTCCCTC GGTAAAGCTC
AATCAAGGCT ATTATGGCGA TGGCTCAGTG CATCAATTGG CTCCCTTAAG CAGTCCTATT
CACCTTGGGG CAAAGAAATT ATTTGTGATC AACCTTGAGA GTCCTCATAA GCAGCAGTCT
CAGGAGCTTG AACATCATCC AAAAACCGCC ACCATCGCAG GTCACCTATT AGATACCATC
TTCTCGGATA CACTTAACAG CGATCTGGAA AGGCTAGAGC GGATAAATAA TACCCTCTCT
TTAATCCCAG AGGAGGATAC CAAAAAGCTG CCGTTAACTC AGATCCAAAC CTTGGTGATC
AAACCCAGTG AAGATTTAAG TAAGCTGGCC TCACGGTATT ATAATGAGAT GCCCTTCGCA
GTTAAGTCGA TGCTCAGACC TATCGGTATC AACCAACAAA CCGATTCAAG TATTGTCTCC
TACCTATTAT TCGAAAAATC TTACTGCTCA GCCTTAATCG ATTTAGGGTA TCAAGATGCC
ATGTGCCAAA TCGATGAGAT TAGAGATTTC TTTGAGATAG AGCAGTGA
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| Protein sequence | MPEKTALVLG GGGARAAYQI GVLKAIVQFY PRNHGIPFKI ICGTSAGAIN GTSIATHASC
FHLGVRKLEW VWRNFRTDKI YSASMSGVLK HLGKMLLMSM QDDKVNTNAG SLFNSEPLRG
LLNELINFAR IDRNIGSGAL SALSIDTSCY NSARSVTFFQ GNHDIAQWHR DRRSGQRTQL
NTDHLLASSA IPLVFPSVKL NQGYYGDGSV HQLAPLSSPI HLGAKKLFVI NLESPHKQQS
QELEHHPKTA TIAGHLLDTI FSDTLNSDLE RLERINNTLS LIPEEDTKKL PLTQIQTLVI
KPSEDLSKLA SRYYNEMPFA VKSMLRPIGI NQQTDSSIVS YLLFEKSYCS ALIDLGYQDA
MCQIDEIRDF FEIEQ
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