| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3220 |
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| Symbol | |
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| ID | 6117539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3946155 |
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| End bp | 3947708 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641634764 |
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| Product | 6-phosphogluconate dehydrogenase |
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| Protein accession | YP_001761585 |
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| Protein GI | 170727559 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0151158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACC ACACCAAATT ATATGATGTT GGCGTCATCG GCCTAGGCGT CATGGGAAAA
AACCTCGCTT TAAATATTGC CGATAACCGA TACAGTGTCG CTGCTTTTGA TTTAGATAGC
GTGAAGGTTG AGGGCGTGCT CGCACAGGAG AAAGCCGACC GAGTAAATAG TAAACAATCT
GAGCAACCAC TGCGGGTGCA TGGCTGTAAT AATCTTTCTG AAATGTTATC TAGCCTCGAG
AAACCTCGAG TGATTGTGCT TTCTGTCCCC GCTGGTGCGC CTGTGGATGG CGTATGCAGT
AGCTTAATCG AAGCGGGCAT TGAGCTTGAT GATATCGTTA TCGACACAGG CAATAGCCTA
TGGACAGATA CCTTAGAGCG CGAAGGTCGT TATGCAGATA ACTTCACCTT TTTCAGCTCA
GCTGTGTCTG GCGGTGAGAT GGGCGCGCGT TTTGGGCCAT CTTTGATGCC AAGCGGCAAT
AAAAAGGCGT GGGATAGAAT TAAGCCTATC TGGGAAGCGA TAGCGGCTAA AGTTGATGCC
AAAACTGGGT TGCCTATTGA GCGTCAAGAG CCTGGTAACC CTGTCACTGA AGGCGAGCCT
TGTACCACCT ATATCGGTCC TGCAGGTGCT GGTCATTACG TTAAAATGGT TCATAACGGT
ATCGAATATG CCGATATGCA ACTTATCTGC GAAGCTTATC AACTCTTGAG CGATGGTTTT
GGTATGTCCG CCGATGAGAT AGCAAACTTA TTTGAGCGCT GGAATAAAGG TAGCCTAAAC
AGCTACCTGA TGGAGATAAG TGCCGAGGTA CTAAAGCAAG CCGATCCGTT TTCAGGTAAG
CCATTAGTTG AGATGATTTT GGATAAAGCT GGCCAAAAAG GCACTGGACT TTGGACTGCT
GTGAGCAGTT TACAGATAGG CTGCCCAGCA CCAACCATTG CTGAAGCGGT TTATGCCCGG
GCCGTGAGTA CTCAAAAATC TCAACGAGTA CAACTGAGCC AGTTACTCAG CGGGCCGCAA
GCGGTTAAGC CAAGTGATGA GGAGCGTGAG GTCTTTATTG AGCAACTAGA AAGTGCACTC
TACTGCGCCA AAGTTGCCAG CTATGCTCAA GGTTTCCAGT TGATGGCGAT GAACGCTAAA
GAGCGTAACT GGACACTCGA GTTCGCCGAA ATTGCTAAGA TCTGGCGTGC AGGCTGTATC
ATCCGCGCCA CTTTCCTGCA ATCGATCACG CAAGCTTATC AGTCTGCCGA GCGCTCAGGC
GTTGAGCTTG AAAACTTGTT GATGGCAGAG ACCTTCAGCC AAGCACTTTC AACCAAACAG
CTTGATTGGC GCAAAGCTGT ATCTACCGCG GTACTCAAAG GCATTCCCGC TCCCTGTATC
AGCTCCGCTT TGGCCTATTA TGACAGCTAC CGCAGTGAGA CTCTGCCAGC AAACTTGCTA
CAAGGTCAGC GTGATTACTT TGGTGCCCAT ACCTTTGAGC GTACCGATAA GCCAGCAGGT
GAGAAGTATC ACCTAAACTG GAGCAGCGTG AAGCGAGAGT TAGATAAAGT CTGA
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| Protein sequence | MENHTKLYDV GVIGLGVMGK NLALNIADNR YSVAAFDLDS VKVEGVLAQE KADRVNSKQS
EQPLRVHGCN NLSEMLSSLE KPRVIVLSVP AGAPVDGVCS SLIEAGIELD DIVIDTGNSL
WTDTLEREGR YADNFTFFSS AVSGGEMGAR FGPSLMPSGN KKAWDRIKPI WEAIAAKVDA
KTGLPIERQE PGNPVTEGEP CTTYIGPAGA GHYVKMVHNG IEYADMQLIC EAYQLLSDGF
GMSADEIANL FERWNKGSLN SYLMEISAEV LKQADPFSGK PLVEMILDKA GQKGTGLWTA
VSSLQIGCPA PTIAEAVYAR AVSTQKSQRV QLSQLLSGPQ AVKPSDEERE VFIEQLESAL
YCAKVASYAQ GFQLMAMNAK ERNWTLEFAE IAKIWRAGCI IRATFLQSIT QAYQSAERSG
VELENLLMAE TFSQALSTKQ LDWRKAVSTA VLKGIPAPCI SSALAYYDSY RSETLPANLL
QGQRDYFGAH TFERTDKPAG EKYHLNWSSV KRELDKV
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